Luteolibacter ambystomatis: KBB96_13260
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Entry
KBB96_13260 CDS
T07769
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lamb
Luteolibacter ambystomatis
Pathway
lamb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KBB96_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lamb03019
]
KBB96_13260
03400 DNA repair and recombination proteins [BR:
lamb03400
]
KBB96_13260
Enzymes [BR:
lamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KBB96_13260
Messenger RNA biogenesis [BR:
lamb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KBB96_13260
DNA repair and recombination proteins [BR:
lamb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KBB96_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
QUE53313
UniProt:
A0A975J3H3
LinkDB
All DBs
Position
complement(3492617..3494704)
Genome browser
AA seq
695 aa
AA seq
DB search
MTPHEALKRYFGFSGFLDGQESVMDEIVSGRDGLVVMPTGGGKSLCYQLPALCFGGVTLV
ISPLIALMKDQVDALIARGIPATMINSTVPWAEQKERLDGMRDGTYKLVYVAPERFRAES
FLNAVRGANVSLFAVDEAHCLSQWGHDFRPDYLRLGKALEKLGRPQCVALTATATPVVRE
DIVSVLKLREPFERVSGFSRPNLSLGITAVEKAAHKDERMRAVIAAHKTGIVYCATRKKV
EAVSETLASWGVKCIAYHGGLSDSERERAQEVFIQRKADVAVATNAFGMGIDRADVRFVV
HYEVPGSVEAYYQEAGRAGRDGEAAVCELLFNYADTRTQEFFIDGANPTPAIIRGIYQYL
LNQADKEYEVHRTLDEIAEGADVKNPMSVGSALTVLARGGYIERFDIAGRRTRGTRLLKP
DVLARGLQLDEASIGEKDRRDREKLKAMVEMCYARTCRQQWILGYFGEEDARTCGGCDVC
RDGGAGESRPPTAEEAMIVKKALSGVARMSRRTPEGWEGRYGRGRIVQMLCGSRSQEILS
AGLDKLSTYGLLKERGTGYLNGLMRALSDAGLLETEPGEYPVVSLTATGDRVMRGDVDYR
LVWPAADDGPANPGLKDHGFDGGLYSMLRDLRMKIADKEGVPPYVIFGNKTLEAFVLYRP
SSEEEALKISGVGVVKAQRYLKPFLDVIKTWKRGR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacgccccatgaggcgctgaagcggtatttcgggttctccggattcctggatgggcag
gaaagcgtgatggacgagatcgtctccggccgggacgggctggtggtgatgcccacgggt
ggcggcaagtcgctgtgctaccagcttccggcgctgtgcttcggcggggttacgctggtg
atttcgccgctgatcgcgctgatgaaggatcaggtggacgctttgatcgcacgcggcatt
ccggcgacgatgatcaattccaccgtcccgtgggcggagcagaaggagcggctcgatggc
atgcgggatggcacctacaagctggtctatgtagctccggaacgcttccgcgcggagagc
tttttgaatgcggtgcgcggcgcgaatgtctcgctgttcgcggtggatgaggcccactgc
ctcagccagtgggggcatgatttccgcccggactatctgcgcctcggcaaggctctcgaa
aagctggggcggccacagtgcgtggccctgactgcgacggccacaccggtggtgcgcgag
gacatcgtctccgtgctcaaactgcgggagccgttcgagcgggtcagcggcttctcacgg
ccgaacctttcgctgggcatcacggcggtggaaaaggccgcgcacaaggacgagcggatg
cgcgcggtgattgccgcgcacaagaccggcatcgtctattgcgccacccgcaagaaagtg
gaggccgtctccgaaactctggcgagctggggcgtgaagtgcatcgcctaccacggtggc
ctcagtgactcggaacgcgaacgcgcgcaggaggttttcattcagcgcaaggcggacgtg
gcggtggcgacgaatgccttcggcatgggcatcgaccgtgcggacgtgcgtttcgtggtc
cactacgaggtgcccggcagcgtggaggcctattatcaggaggcgggccgcgccggtcgt
gatggcgaggcggcggtatgcgaactgctgttcaactacgccgacacccgcacccaggag
ttcttcatcgatggcgcgaaccccacgcccgcgatcatccgcggcatctaccagtatctg
ctgaaccaggcagacaaggagtacgaggttcatcgtacgttggacgagatcgccgagggc
gcggacgtgaagaatccgatgtccgtgggcagcgcgctgaccgtgctggcgcgcggcggc
tatatcgagcgcttcgacatcgccgggcgccggacccgcggcacccgcctgttgaagccg
gacgtgctcgcgcgcggcctccagcttgacgaggcgtccatcggcgaaaaggaccgccgc
gatcgcgagaaactcaaggcgatggtggagatgtgttacgcgcgcacctgccgccagcag
tggattctcggctacttcggcgaggaggacgcgcgcacctgcggcggttgtgatgtctgc
cgggatggtggagcgggggaatcgcggccgccgacggcggaggaagcgatgatcgtgaag
aaggcgctcagcggcgtggcccgcatgtcccgtcgcacgcccgaaggctgggaggggcgc
tatggccgtggccgcattgtgcagatgctgtgtggcagccgttctcaggaaatcctctcc
gccgggctcgacaagctgagcacctacggcctgctcaaggaacgcggcaccggttatctg
aacgggctcatgcgcgcactgtccgatgccggcctgctcgaaaccgagcccggtgaatat
cccgtcgtttcactcaccgctaccggtgaccgcgtgatgcgcggggatgtggattaccgt
ctcgtttggcccgcggcggacgatggcccggcgaatcccgggttgaaggaccacggcttc
gatggcggcttgtattcgatgctgcgggatctgcggatgaagatcgcggacaaggaagga
gtgccgccgtatgtgatcttcgggaacaagaccttggaagctttcgtgctctatcgtcct
tcctcggaggaagaggcgctcaagatttccggcgtgggcgtggtgaaggcacagcgctac
ctgaagccgttcctggatgtcatcaagacgtggaagcgcgggcgctga
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