Luteolibacter ambystomatis: KBB96_16970
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Entry
KBB96_16970 CDS
T07769
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lamb
Luteolibacter ambystomatis
Brite
KEGG Orthology (KO) [BR:
lamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lamb03019
]
KBB96_16970
Messenger RNA biogenesis [BR:
lamb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KBB96_16970
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GFIT
Motif
Pfam:
HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QUE50543
UniProt:
A0A975G836
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Position
4397861..4398997
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AA seq
378 aa
AA seq
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MSGFPLSVRDSGRGAVDGAGVNFLTIAALKAQAGEQALTAVVDAELQSRSARQTKTGKPY
LVLTFADATGSFALNAWSDAPLFDAANGLPDGTVMRLDADWTQNTYGVNAVNVAWERLTG
DALEAFYAGDAATAEKQRRDWDTITSLCASVNDPRLHALADHFIKDFGSRFRRAAAARKN
HHARRGGLVEHVAQMMRTADAVCSVYPRLNRDLLLIGTLFHDCGKLWENQYKERGFTQDY
SIHGEMLGHIPLGIELVNKLWRDVAESPAGKGWLTLEPATETVRLHLLHLIASHHGEYQF
GSPTLPRTPEAIALHHIDNLDAKMEMMMDAYENANELADGIYEKQFPLPANLVAPLPAFE
PPPSPVPAAAASRGSELF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggctttccgctctccgttcgtgacagcggacgcggggccgtggatggtgcgggg
gtgaatttcctgaccatcgcggccctcaaggcacaagcgggcgaacaggcgctgaccgcc
gtcgtcgatgccgagctccaatcgcgcagcgcgcgccagaccaagaccggaaagccgtat
ctcgtcctcaccttcgccgatgccaccggcagctttgctctcaacgcgtggtcggacgcg
ccgttgttcgatgccgcaaacggcctgcctgatggcacggtgatgcggctggatgcggac
tggacccagaacacctacggtgtgaatgccgtcaatgtcgcttgggaacgcctcaccgga
gatgccttggaggccttctatgccggggatgcggccacggcggaaaagcagcggagggat
tgggacaccatcaccagtctgtgcgcttccgtgaacgacccgcgcctgcacgcgctggcg
gatcatttcatcaaggacttcggctcccgcttccggcgagcggcggcggcgcggaaaaac
catcatgcccgccgcggtggtctggtcgagcacgtcgcccagatgatgcggaccgccgat
gccgtgtgttccgtgtatccccgtctgaaccgcgacctgctcctcatcggcacattgttc
cacgactgcggcaagctgtgggagaaccagtacaaggagcgcggcttcacccaggactat
tccatccatggcgagatgctcggtcacatcccgctgggcatcgagctggtgaacaaactc
tggcgcgatgtcgcggaatccccggccgggaaaggctggctgacgttggaacccgccacg
gaaaccgtgcgcctccacctcctgcacctcatcgccagccatcacggcgagtatcaattc
ggctcccccacgctgccgcgcactccggaggcgatcgcgctccaccacatcgacaatctc
gatgcgaagatggaaatgatgatggacgcttacgagaacgcgaacgagctggcggacggc
atctacgaaaagcagttcccgctgcccgcgaacctggtggccccgctgcctgcgttcgag
cctccgccttccccggtgcccgctgctgccgcatcccgcggcagcgagttgttctga
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