Luteolibacter ambystomatis: KBB96_19620
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Entry
KBB96_19620 CDS
T07769
Symbol
rpiB
Name
(GenBank) ribose 5-phosphate isomerase B
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lamb
Luteolibacter ambystomatis
Pathway
lamb00260
Glycine, serine and threonine metabolism
lamb00460
Cyanoamino acid metabolism
lamb00630
Glyoxylate and dicarboxylate metabolism
lamb00670
One carbon pool by folate
lamb00680
Methane metabolism
lamb01100
Metabolic pathways
lamb01110
Biosynthesis of secondary metabolites
lamb01120
Microbial metabolism in diverse environments
lamb01200
Carbon metabolism
lamb01230
Biosynthesis of amino acids
lamb01240
Biosynthesis of cofactors
lamb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lamb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KBB96_19620 (rpiB)
09102 Energy metabolism
00680 Methane metabolism
KBB96_19620 (rpiB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KBB96_19620 (rpiB)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KBB96_19620 (rpiB)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KBB96_19620 (rpiB)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KBB96_19620 (rpiB)
Enzymes [BR:
lamb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KBB96_19620 (rpiB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
LacAB_rpiB
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
QUE51052
UniProt:
A0A975G912
LinkDB
All DBs
Position
complement(5018606..5020279)
Genome browser
AA seq
557 aa
AA seq
DB search
MSTKTLRIALGADHGGVDLKDSLVAHLKASGHEVTDLGTHGHESVDYADFANAVARTVAD
GTSDYGVLCCTSGIGVSIAANRHRHVRAAVVRTVEEATVTREHNDANVLCLGGKETDAAT
GAAIVDAFLSTAFAGGRHEARVCKSSGSRIAEIDPDLYKAIFAEERRQRNNIELIASENF
ASPAVMEAQGSVLTNKYAEGYPGKRWYGGCENVDVVEQLAIDRAKALFGAEHANVQPHSG
SQANTAVYFSVLKPGDRILTMDLAHGGHLTHGHKANFSGRFYDVIHYGVSEKDERIDYDQ
LERMARETKPALITVGASAYPRIIDFERMGKLAREVGAYLFVDMAHIAGLVAGGEHPNPV
PHADFVTSTTHKSLRGPRGGIILCKEEFAKKIDSQVFPGIQGGPLMHVIAAKAVCFGEAL
KPEFKDYQAQIVKNAQAMAARLTEHGFRIVSGGTDNHVMLVDLRPKGLNGADASHALDEA
GITVNKNAIPFDTGTPMKPSGIRIGTPAVTTRGMKEKDVEQVADFIQEALENYKDTAKLH
EIRDRVFEFNRAFPMPA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaagaccctgcgtatcgcactcggcgccgaccacggcggagttgacctcaag
gattcccttgtcgcccatctgaaggcctccggccacgaggtgaccgatctcggtacgcac
ggtcacgagtccgtggattacgcggatttcgccaacgcggtggcccgcaccgtggccgat
ggcaccagcgactacggcgtgctctgctgcacctccggcatcggcgtttccatcgccgcg
aaccgtcaccgccacgtccgcgccgcggtcgtccgcacggtggaggaagccacagtcacc
cgtgagcacaacgacgccaacgtcctctgcctgggtggcaaggaaacggatgccgccacc
ggcgccgcaatcgtggacgccttcctttccaccgcttttgccggtggccgtcacgaagcc
cgcgtctgcaagtcctccggcagccgcatcgccgagatcgatccggacctctacaaggcg
atcttcgccgaagagcgccgccagcggaacaacatcgagctgatcgcttccgagaacttc
gcctcccctgcggtgatggaggcccaaggctccgtcctcaccaacaagtatgccgagggt
tatcccggcaagcgctggtacggtggttgtgagaacgtcgatgtggtcgagcagctcgcc
atcgaccgcgccaaggccctcttcggtgccgagcacgcgaacgtccagccacactccggc
tcgcaggcgaacaccgccgtttatttctccgtgttgaagccaggcgaccgcatcctgacc
atggatctggcccacggcggtcacctcacccacggccacaaggcgaacttctccggccgt
ttctacgatgtcatccactacggcgtcagcgaaaaggacgagcgcatcgactacgaccag
cttgagcgcatggcccgtgaaaccaagcccgccctgatcaccgtaggcgcgtccgcctat
ccgcggatcatcgatttcgaacgtatgggcaagctcgcccgtgaagtgggtgcctacctc
ttcgtggacatggcgcacatcgccggcctcgtcgccggtggcgagcacccgaatccggtg
ccgcacgccgacttcgtcacctccaccacccacaagtccctgcgcggaccgcgcggcggc
atcatcctgtgcaaggaggagttcgcgaagaagatcgattcccaggtcttcccgggcatc
cagggcggcccgctgatgcacgtcatcgccgccaaggccgtctgcttcggcgaggctctc
aagccggagttcaaggactaccaggcccagatcgtgaagaacgcccaggccatggccgcc
cggctcaccgaacacggtttccgcatcgtctccggcggcaccgacaaccacgtcatgctg
gtcgacctccgtccgaagggcctcaacggcgcggatgcttcccacgccctcgatgaagcg
ggcatcacggtgaacaagaacgccatcccgttcgacaccggcaccccgatgaagccgagc
ggcatccgcatcggcactccggctgtgaccacccgcggcatgaaggaaaaggacgtcgag
caggtcgccgacttcatccaggaagccctcgaaaactacaaggacaccgcgaagctccac
gagatccgcgaccgcgttttcgaattcaaccgcgccttcccgatgccggcctga
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