Lacinutrix sp. 5H-3-7-4: Lacal_0356
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Entry
Lacal_0356 CDS
T01533
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
lan
Lacinutrix sp. 5H-3-7-4
Pathway
lan02024
Quorum sensing
lan03060
Protein export
lan03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Lacal_0356
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Lacal_0356
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lacal_0356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lan02044
]
Lacal_0356
Secretion system [BR:
lan02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Lacal_0356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
DUF4929
DUF2811
Motif
Other DBs
NCBI-ProteinID:
AEH00208
LinkDB
All DBs
Position
complement(398826..401843)
Genome browser
AA seq
1005 aa
AA seq
DB search
MQNKGLVILFAILFGLVSIYQLSFSFGNSSIESDAEQFAASKIDASVEDFKNKRKALEVN
YLDSLASSKESVFMGSTYAEVKENSMKLGLDLKGGLEAILQVSVKDILKGLANNSKDPVF
NKALEDADELQKNSQNDYIEDFYTSFDAIKGDKKLSSPDIFATRSLEDEIRMDSSEEDVK
RVITRKIDESINSALQVLRTRIDQFGVASPNIQRLGTSGRILVELPGVKDVERAKALITG
TAQLEFWFAMKADGLYQYMSDVNAFLKNEQEAAVTATDSTAVEADEAEEADDLIGDLTGE
TDETTTVVNPFLDLVKGPGYQGGPILGMFNITDKQKVLDILNRREIKSLLPANAKEAKFV
FGKPEKDSELIALYALQGNRDNVPPLSGSIDDARQDYNLANQVVVSMQMDAKGSRIWEEM
TTKAYKEGSQIAIVLDNLVYSAPGINNGPIAGGSSQISGDFTVNEAIDLANVLRAGKLPA
KATIIQSDEVGPTLGQEAIDSGTMSFGIALALVLIWMFFYYGKAGLFADIAMLLNILLIF
GVLSGIGAVLTLPGIAGIVLTIGMSVDANVLIFERIREELAKGKDQKSAIKDGFSNALSS
ILDANITTGLTALILFVFGTGPIKGFATTLLIGIGTSLFTAIFITRLLVDWYANKGGKLD
FSTGITKNLFRNINIAFLKKRKTAYIISAVLIVGSLASLFTNGLDEGVDFVGGRTYQVRF
DQPVSASEITATLSDAAVFGSADAKTFGEDNQLKITTKHRIDEATEEADEEMRQTLFNAL
QPHLNGMDYAAFISNAEGKTAGLMKKYKVSPTIADDIKKASFWAVLGSLIVVFLYILFRF
KRWQFSLGAVAAVFHDVLIVLGVFSLTYKFMPFSMEIDQAFIAAILTVIGYSLNDTVVVF
DRIREFFNEHTDWDFDRVIDKSLSSTLSRTLNTSLTTLVVLLAIFIFGGESIRGFMFALI
VGVIVGTYSSLFIATPIMYDSVKKGDATDALRNKVQEEELDEAKA
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaaaggattagtaatattatttgctattttattcggtttggtaagtatttat
cagttgtctttctcatttggaaacagcagtatagaatctgatgccgaacaattcgcagca
tcaaaaatagatgcttccgtagaagattttaaaaacaaaagaaaagccttagaagtaaac
tatttagattcattagcatcttcaaaagaaagtgtattcatgggaagcacttatgcagag
gttaaagaaaactcaatgaagttaggtcttgaccttaaaggtggtttagaggctatctta
caagtatctgtaaaagatatcttaaaaggattggctaataacagtaaagatcctgtattt
aataaagctttagaagatgcagacgagcttcaaaaaaattctcaaaacgattatatcgaa
gatttttatacatcatttgatgctataaaaggagataaaaaattatcatctccagatatt
tttgcaacacgttctttagaagatgaaataagaatggactcttcagaagaagacgtaaaa
agagtaattacaagaaaaattgatgagtcaataaattctgcattacaagtattacgtaca
cgtattgaccaatttggtgtagcatctccaaacattcaacgtttaggaacttctggtaga
attttagtagaattaccaggtgttaaagatgtagagcgagcaaaagcattaataacagga
acagcacaattagagttttggtttgctatgaaagcagatggtttatatcaatatatgagt
gatgtaaacgctttcttaaaaaacgaacaagaagcagcagttacagctacagattctaca
gcagtagaagcagacgaagcagaagaagccgatgatttaattggtgacttaacaggtgaa
acagatgagactacaacagtagttaacccatttttagatttagttaaaggtcctggatac
caaggaggcccaatacttgggatgtttaatattacagacaagcaaaaagtattagatata
ttaaatcgccgtgaaattaaatcgcttttacctgcaaatgctaaagaagctaaatttgta
tttggtaagccagaaaaagacagcgaattaatagcgctatatgctttacaaggtaataga
gataatgtaccaccattaagtggtagtatagatgatgcaagacaagattataacttagcg
aaccaagtagttgtttctatgcaaatggatgcaaagggatcaagaatttgggaagaaatg
acaactaaggcttataaagaaggaagccaaattgctattgtacttgataacttagtatac
tctgcgccaggtattaataatggacctatagcaggaggaagttctcaaatttcaggagac
tttacagtaaacgaagcaatagatttagcaaacgttttacgtgctggtaaattacctgca
aaagcaacaattattcaaagtgatgaggtaggaccaacattaggtcaagaagcgatagat
agtggtacaatgtcttttggtattgctttagcattagttttaatatggatgttcttttac
tacggtaaagcaggtttatttgcagacattgcaatgctattaaacatcttattaattttt
ggagtattatcaggaattggtgctgtattaacactaccaggtatcgctggtattgtatta
acaattggtatgtcggtagatgcaaacgtacttattttcgagcgtattagagaagaatta
gcaaaaggtaaagaccaaaaatctgcaattaaagatggatttagtaatgcattatcttca
attttagatgccaatataacaacaggattaacagcactaatattatttgtatttggtaca
ggaccaattaaaggttttgcaactacattattgataggtataggtacatcattatttaca
gcaatctttattacaagattattagtagactggtatgcaaacaaaggaggtaagttagat
ttctcaacaggaattactaaaaacttatttagaaacattaatatagccttcttaaagaaa
cgtaaaacagcctacattatctctgcagtattaatagtaggaagtttagcatcattattt
actaatggtttagacgaaggtgtagattttgttggaggtagaacttaccaagtacgtttt
gatcaaccagtaagcgcatcagaaattacagcaacattatcagacgcagcagtatttggt
agtgcagatgctaaaacatttggagaagacaaccagttaaaaattacaacaaagcataga
attgatgaagcaacagaagaagcagacgaagaaatgcgtcaaactttatttaatgcttta
caaccacacttaaacggtatggattatgcagcatttattagtaatgccgaaggaaaaaca
gcaggactaatgaaaaagtataaagtaagtccaacaattgcagacgatattaaaaaggca
tcattctgggccgttttaggatcattaattgtagtattcctatacatcttattccgtttt
aaaagatggcaattctcacttggtgcagtagcagcagtattccacgatgtattaatcgta
ttaggagtattctctctaacatacaagtttatgccattctcaatggaaatagatcaagca
tttatagcagccatacttacagtaattggttactcattaaatgataccgtagttgtattc
gatagaattcgtgaattctttaacgagcatacagactgggatttcgatagagtaatagac
aaatctttaagctctacattaagtagaacattaaacacctctttaactacattagtagta
ttattagccatctttatttttggtggagaatcaattagaggtttcatgtttgcattaata
gtaggtgtaatagtaggtacatattcatctttatttatcgcaacaccaatcatgtacgat
agtgttaaaaaaggagatgcaacagatgctttaagaaacaaagtacaagaagaagaatta
gacgaagcaaaagcttaa
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