Lacinutrix sp. 5H-3-7-4: Lacal_0854
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Entry
Lacal_0854 CDS
T01533
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lan
Lacinutrix sp. 5H-3-7-4
Pathway
lan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lacal_0854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lan03400
]
Lacal_0854
DNA repair and recombination proteins [BR:
lan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Lacal_0854
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Lacal_0854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RPAP3_C
Motif
Other DBs
NCBI-ProteinID:
AEH00702
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All DBs
Position
complement(987577..988296)
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AA seq
239 aa
AA seq
DB search
MIATTNAIVLSKLKYKDNDLIVKCYTQEFGIVSYLLRGVLKSKKKGSKVAYYQLLTQLHL
VTDYKQARGLQYVKEVKINHLYSNLHTNILKSAIVLFLAEVLSTTLQEEEQNATLYNYLE
TTLQWLDTNDRYSNFHLLFLLNLTKHLGFYPDITDINLPYFNLQAGEFQDMSSSKYCISG
ENLTLLKTLLGTTFDALEEVKMNSKQRQSFLAIILLYFELHLGSFKKPKSLQVFNDVFN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgactacaaatgctattgtactttctaaattaaaatacaaagacaatgacctt
attgtaaaatgctacacgcaagaatttggtattgttagctatttattacgtggtgtttta
aaatctaaaaaaaaaggatctaaagttgcttactatcaattgttaacacaattacatctt
gtaacagattataagcaggcaagaggcttgcagtatgtaaaagaagttaaaataaatcac
ctttactccaatttacacaccaatatattaaaaagcgctattgttttatttttagccgaa
gtgttaagtactactttacaagaggaagaacaaaatgctacattatataattatttagaa
accaccttgcaatggttagatactaatgatcgttattcaaactttcatttattgtttcta
ttaaacctaacaaaacacttagggttttacccagatattacagatataaacttgccatat
tttaatcttcaggcaggagaatttcaagatatgagtagtagtaaatattgtatttcgggc
gaaaatttaacactcttaaaaacacttttgggcacaacatttgatgcgttagaagaagtc
aaaatgaattcaaaacaaagacaatcgtttttagccattattttgttgtattttgaacta
catttgggcagctttaaaaaaccaaaatcactacaagtttttaatgacgttttcaactaa
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