Lacinutrix sp. 5H-3-7-4: Lacal_1257
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Entry
Lacal_1257 CDS
T01533
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lan
Lacinutrix sp. 5H-3-7-4
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lan03016
]
Lacal_1257
Enzymes [BR:
lan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Lacal_1257
Transfer RNA biogenesis [BR:
lan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Lacal_1257
Prokaryotic type
Lacal_1257
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5381
SAM_PNT
Glyco_hydro38C2
Motif
Other DBs
NCBI-ProteinID:
AEH01105
LinkDB
All DBs
Position
complement(1444571..1445269)
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AA seq
232 aa
AA seq
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MTLEDYQAGQVLLIDKPLNWTSFQVVNKLRWEIKQAFKIKKIKVGHAGTLDPLATGLLVI
CTGKMTKQINTFQGQIKEYTGTIVLGSTTPSFDLETEINKTFSTSHITNYLIHQTTKQFI
GEIDQFPPVFSALKKDGKRLYEFARAGEDVEIKSRKITINAFEITNIKENTVDFRVVCSK
GTYIRSLANDFGKALNSGGHLSVLRRTKIGDFNVENALSIESFITALPKKTE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgaagattaccaagcaggacaagttttgctaatagacaagccgttaaattgg
acgtcatttcaagttgtaaataaattacgttgggagattaaacaagcctttaaaataaaa
aaaattaaagttggtcatgctggtactctagatcctttagccacaggattactagttatt
tgcacaggaaaaatgaccaagcaaataaatacatttcaaggtcaaataaaagaatacaca
ggtacaattgttttaggtagtacaactccatcttttgatttagaaaccgaaataaacaaa
acattttctacaagccatatcactaactatttaatacaccaaacaaccaaacagtttatt
ggtgaaatagaccaatttccacctgttttttcagcattaaaaaaagatggaaaaagactg
tatgaatttgcacgtgctggtgaagatgttgaaataaaatctagaaaaattactataaac
gctttcgagatcacaaatattaaagaaaacactgtagattttagagtagtttgcagcaaa
ggtacctacatacgttctttagcaaacgattttggaaaagcactaaattctggtggacac
ctttctgttttacgccgaacgaaaattggagattttaatgttgaaaatgcactttctatt
gaaagttttattactgcattacctaaaaaaacggaataa
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