Lacinutrix sp. 5H-3-7-4: Lacal_1577
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Entry
Lacal_1577 CDS
T01533
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lan
Lacinutrix sp. 5H-3-7-4
Pathway
lan03030
DNA replication
lan03430
Mismatch repair
lan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lacal_1577
03430 Mismatch repair
Lacal_1577
03440 Homologous recombination
Lacal_1577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lan03032
]
Lacal_1577
03400 DNA repair and recombination proteins [BR:
lan03400
]
Lacal_1577
Enzymes [BR:
lan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lacal_1577
DNA replication proteins [BR:
lan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lacal_1577
DNA repair and recombination proteins [BR:
lan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lacal_1577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
AEH01425
UniProt:
F6GC79
LinkDB
All DBs
Position
complement(1788968..1791925)
Genome browser
AA seq
985 aa
AA seq
DB search
MYLNCHTYYSLRYGTFSELDLLDLAKENNYDSIVLSDINNTSACLNFIHQANLRNIKPVV
GIDFRNGAEQKFVGIAKNNVGFKELNDFMSQHSQHKMLIPDLAPNFENVFIIYPFEKVLQ
LNKKCFEPYEFIGVSINDLKKLRFSQLKKHSQHLVFLQQVTIRDKGDFNAHRLLRAIDNN
ILLSKLEKTEECSIQHKMLSSVELEKAFVEFPFILQNTKNILNQCSINFGFGNERKSQNL
KVYTDSFENDFKLLERLCKEKISTRYVAPSKKVKERLYKELETIKSMRFVSFFLINYDII
SYAKSKGYFHIGRGSGANSIVAYIIGITDVDPIELDLYFERFINPFRASPPDFDIDFSWK
DRDDVTAYIFKRFKHTALLATYNTFKYRAAVREIGKVFGLPKEEIDKLCKNNFNYYKLDE
FSKLVIKYAKLIEGFPNYISVHSAGILILDKPIHNYSATNLPPKGFPTLQFDMNIAEDVG
IFKFDILGQRGLAKIKDALEIISENRPDSPPIDITNIEAFKKDPKINNLLKSGGAIGAYY
VESPAMRGLMQQLQTQNYIELVAASSIIRPGVSGSGMKEEFIKRHRYPEKRKEAHPILYK
IMPETYGVMVYQEDVLKVANQFAGLTLGEADVLRRGMSGKYRSKKEFEAVEEKFYKNCRN
KGFDEKLITDVWNQIKSFAGYAFAKGHSASYAVESYQSLYLKCYYPLEFMTAVLNNGGGF
YSAEHYFHEARKQGAKICAPCINKSDHPNKLIGKTIYLGFGYLKNLELFTIKRILSERQL
NGDFTSLDNFIDRLTITIEQLTILIRIDAFKFTGKSKVELLWHSIFKLNAKRDYNSQSKL
FISEHKKFNLPKLNVSWIENAYDEMELLGFPLCDYFNLVNENTDNGILALKMKNYVGKNV
LIYGSLVTTRYNNTSKGELMRLSTFIDKEGNYFDAVHFSSVVDKFPINGLGVYACFGKIT
NRFDFCSMSVIRSRKMGVIKDPRNT
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaaactgtcacacatattactcattaagatatggaacgttttctgagttagac
ctgttagatttagctaaagaaaataattacgactctattgtcctttctgatattaacaat
acatctgcatgtttaaattttattcatcaagctaatttaagaaacattaaacctgttgta
ggtatcgattttagaaacggagcagaacaaaaatttgttggcatagcaaaaaacaatgtt
ggatttaaagaacttaatgattttatgtctcaacattctcaacataaaatgttgatacct
gatttagcacctaattttgagaatgtttttattatttatccttttgaaaaagtattacaa
ctcaacaaaaaatgttttgagccttatgaatttataggtgtttccataaacgatttaaaa
aaactcaggttttcacaactaaaaaaacatagtcaacatcttgtgtttcttcaacaagtt
accataagagataaaggtgattttaatgctcataggcttttaagagcaattgacaacaat
attttgttaagtaaacttgaaaaaactgaagaatgtagtattcaacataaaatgttgtcg
agtgttgaactagaaaaagcttttgttgaatttccttttattttacaaaacacaaaaaac
atattaaaccagtgtagcattaattttggttttggaaatgagcgtaaatctcagaattta
aaggtttatacagattcttttgaaaacgattttaaattattagagcgtttatgtaaagaa
aaaatatcaacacgatatgtggcaccaagtaaaaaggtaaaagagagattatataaagaa
ttagagactatcaagtcaatgcggtttgtttctttttttctaataaattatgatattata
tcgtatgcaaaaagtaaagggtattttcatattggtagaggaagtggtgcaaatagtatt
gttgcctatataattggaattacagatgtagatcccattgaattagatttatattttgaa
agatttataaatccgtttagagcttcaccacctgatttcgatattgatttttcttggaaa
gaccgtgatgatgttacagcttatattttcaaaagatttaaacatacagcattgttagca
acatataatacatttaaatatcgagcagcagtaagagagattggtaaagtgtttggcttg
ccaaaagaagaaatagataagctttgcaaaaacaatttcaactattataaattagatgaa
ttttcaaaattagtaataaaatacgctaaacttatagaaggttttccaaattatataagc
gttcattcggcaggaatattaattttagataagccaattcacaattattcagctacaaat
ttacctcctaaaggctttccaactctacaatttgacatgaatattgcagaagatgttgga
attttcaagtttgatatattaggtcaaagaggattagctaaaataaaagatgctttagaa
attatttcagagaacagaccagattctcctccaattgatataacaaatattgaagctttt
aaaaaagatccaaaaattaataatttattaaaatcgggaggcgcaataggtgcttattat
gtagagtcaccagctatgcgtggattaatgcaacaattgcaaactcaaaattatattgaa
ttagtcgcagcaagctctataattagaccaggagtttcaggctcaggaatgaaagaagag
tttataaaacgacatagatatccagaaaaaagaaaagaagcacatccaatattgtataaa
attatgccagaaacttatggtgtaatggtatatcaagaagatgtattgaaagtagcaaat
caatttgccggtttaacactaggagaagcagatgttttaagaagaggaatgagtggtaag
tataggtctaaaaaagaatttgaggctgtagaagagaaattttataaaaattgtagaaat
aaaggttttgatgaaaaactaataactgatgtttggaatcaaattaaaagttttgctggt
tatgcttttgcaaaaggacattctgcttcttatgcagtagaaagttatcaaagcctttat
ttaaaatgttattacccattagagtttatgactgccgtattaaataatggtggcggattt
tatagtgcagaacattatttccatgaagctagaaaacaaggtgctaaaatttgtgctcca
tgtattaataaaagtgatcatccaaataaattaataggaaagaccatttatttaggattt
ggatatttaaaaaatttagaactattcactattaagcgtatactatcagagagacaatta
aatggcgactttacatctttagataactttattgacagattaacaattactatcgagcaa
ctaactattttaattagaattgacgcatttaagtttactggtaaatctaaagtagaattg
ttatggcattcaatatttaaattaaatgcaaagcgcgattataactcacaatcaaaactt
tttatatcagaacacaaaaaatttaatttacctaagttaaatgtaagttggattgaaaac
gcatatgatgaaatggagttattaggatttccattatgtgattactttaatttagtaaat
gaaaatacagataatggaattcttgctcttaaaatgaaaaactatgtaggcaaaaatgtt
ttaatatatggtagtttagtaactactcgttataacaacacatcaaaaggtgagctaatg
cgtttaagcacatttatagataaagaaggtaattattttgatgcagtgcattttagtagt
gtagtagataaatttccaataaatggtctaggagtttatgcctgttttggaaaaataacg
aataggtttgatttttgtagcatgagtgtaattagaagcaggaaaatgggtgttataaag
gatccaagaaacacttaa
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