Lacinutrix sp. 5H-3-7-4: Lacal_1928
Help
Entry
Lacal_1928 CDS
T01533
Name
(GenBank) Xenobiotic-transporting ATPase
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lan
Lacinutrix sp. 5H-3-7-4
Pathway
lan02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lacal_1928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lan02000
]
Lacal_1928
Transporters [BR:
lan02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Lacal_1928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
DUF5906
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEH01774
LinkDB
All DBs
Position
complement(2172047..2173804)
Genome browser
AA seq
585 aa
AA seq
DB search
MKELQHLNKYFLKYKKQLILGIVITIASKLFTVFIPKLISKIIDSISAEMQNATENLEVF
KSVLLESILLIIGTAIATGILTFFMRQLIINVSRYIEFDLKNEVYQQYQKLSLNFYKKNR
TGDLMNRISEDVGKVRMYVGPAIMYSINTITLFIVVLVFMFKQAPQLTLYTIIPLPILSV
LIYKISKQIHKRSTVVQQYLSKLSTFTQESFSGISVIKAYGIEPQTATNFNNLAEGSKQK
HLHLVQIQAFFFPMMLLLIGISNIIVIYFGGKQYMAGEISLGNIIEFIMYVNMLTWPVAT
VGWVTSIVQEAEASQKRINEFLKVEPEIKNKNTSLSKITGNISFKDVHFTYDDTNIQALK
GVSFNIKAGETLAIIGKTGSGKSTILDLIGRLYDIDSGTLLIDNTPIDQLNLYNLRDAIG
YVPQDAFLFSDTINNNIKFGKENATDNEVIAAAKNAQVHKNISKFAKQYETVLGERGITL
SGGQKQRVSIARAIIKDPEILLFDDCLSAVDTETEEKILNNLKKVSAGKTTIIVSHRISS
AKNADHIIVLDDGKIVQKGTHSGLIDIDGYYKELYLNQLTENTSN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattacagcaccttaacaaatatttccttaaatataaaaaacagcttatacta
ggtattgttattacaattgcatctaagttatttactgtgttcattcccaagctaatatct
aaaattatagatagtattagtgccgagatgcaaaacgcgactgaaaacttagaggttttt
aaatcggttttattagaaagcatactccttattataggtactgctattgctactgggatt
ttaactttttttatgcgtcaacttattattaatgtatcgcgttatatagagtttgattta
aaaaacgaagtctaccaacaataccaaaagctctctttaaatttttataaaaaaaataga
actggagatttaatgaaccgcattagtgaagatgttggtaaagtaagaatgtatgttggt
cctgctataatgtatagtattaataccattactttatttatagttgtattggtgtttatg
tttaaacaagcaccacaacttacattatatactataattccattaccaatattatcggtt
ttaatatataaaattagtaaacaaatacataagcgaagtactgtagtacaacaatattta
tctaaactttctacatttactcaagaatcttttagtggtatttcggttataaaagcctat
ggaatagagccacaaactgctactaactttaataatttagctgaaggcagcaaacaaaaa
cacctacatttagtacaaattcaagctttcttttttcctatgatgcttttattaataggt
attagcaacattattgttatctattttggtggcaaacaatatatggctggagaaatttct
ttaggaaatattatagagtttataatgtatgtaaatatgttaacttggccagtagcaacc
gttggttgggtaacctctattgtacaagaagcagaagcttcgcaaaaaagaataaatgag
tttttaaaagtagaaccagagattaaaaacaaaaatacgtcactatctaaaataacaggt
aatattagtttcaaagatgtacactttacatatgacgacactaatattcaagctttaaaa
ggtgtaagttttaatataaaagcgggagaaacattagctattataggaaaaactggttct
ggtaaatctacaattttagacttaataggccgtttgtacgatatagactctggaacacta
ttaatagacaacacaccaatagaccagttaaatctatataacctacgcgatgccattggt
tatgtacctcaagacgcctttttatttagcgacactataaataacaatattaaatttggt
aaagaaaatgcaacagataatgaagtaattgctgctgcaaaaaatgcacaagtacataaa
aatattagcaaatttgctaagcaatatgaaactgttttaggagaaagaggtattacttta
tctggaggacaaaagcaacgtgtatctattgctagagcaataattaaagatccagaaata
ttattatttgacgattgcctatctgccgtagatacagaaactgaagaaaaaatacttaac
aacctaaaaaaggtttctgctggaaaaacgaccataattgtgagtcacagaatatcatca
gctaaaaatgcagatcacattattgttttagacgatggtaaaattgtacaaaaaggaaca
catagcggcttaattgatatagatggttattataaagagctttatttaaaccaattaacc
gaaaacacatccaattaa
DBGET
integrated database retrieval system
