Lacinutrix sp. 5H-3-7-4: Lacal_1971
Help
Entry
Lacal_1971 CDS
T01533
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lan
Lacinutrix sp. 5H-3-7-4
Pathway
lan00061
Fatty acid biosynthesis
lan00071
Fatty acid degradation
lan01100
Metabolic pathways
lan01212
Fatty acid metabolism
lan02024
Quorum sensing
lan04146
Peroxisome
Module
lan_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Lacal_1971
00071 Fatty acid degradation
Lacal_1971
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Lacal_1971
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lacal_1971
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lan01004
]
Lacal_1971
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lan04147
]
Lacal_1971
Enzymes [BR:
lan01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Lacal_1971
Lipid biosynthesis proteins [BR:
lan01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Lacal_1971
Exosome [BR:
lan04147
]
Exosomal proteins
Exosomal proteins of breast milk
Lacal_1971
Exosomal proteins of breast cancer cells
Lacal_1971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEH01817
UniProt:
F6GF20
LinkDB
All DBs
Position
complement(2216457..2218232)
Genome browser
AA seq
591 aa
AA seq
DB search
MTEITRLFDFPYYQLEKYNLDAALVTKYNGKWTPMSTKEYVDKANAVSRALLRMGIQKND
KIAVISTTNRTEWNIMDIGILQLGAQNIPIYPTISSDDYEYVLNHSESIYCFVSDEEVLA
KVNKIKANTKLKEVYSFNHIEGCKHYSELFELGKDETNQNEVQERMDAVSPNDLATIIYT
SGTTGKPKGVMLSHNNITSNALDASHRLPFMNSKENRILSFLPICHVFERVLIYLYQYAG
ASIYFAEGIDKIGDNAKEIKPHLMSVVPRLLEKVYDKIIAKAEELSGVKKALFFWAVNLA
EKWEPYGANGAWYEFKLKIANKLIFSKWREALGGELNTMVSGSAALQVRLSRIFSAAGMQ
VMQGYGLTETSPVISVEMYRNKHFKLGTVGKPIKNVEVKIAEDGEILVKGPNVMMGYYKD
PERTDSVMTGEYFHTGDKGNLDSEGFLKITGRKKEMFKTSGGKYVIPTLLENELKQSRFI
EQVMVIGEGEKMPAAIIQPNFEFIEDWIDRKKKNIGKSGEDIANSKEIILRIQQEVDACN
KHFGKWEQIKRFELTPDVWSIDSGHLTPTMKMKRTVIKDIYKELYNKIYRN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaatcacacgccttttcgattttccatattatcagctagaaaaatataatctt
gatgccgcattagttactaaatacaacggtaaatggacgcctatgtctacaaaagaatat
gtagataaagcaaacgcagttagtcgtgctttattaagaatgggaattcaaaaaaatgat
aaaatcgctgtaatttcaacaactaatagaactgaatggaatattatggatattggtatt
ctgcaattaggagcacaaaacattcccatatatccaacaatatcatcagacgattacgaa
tatgttttaaaccatagtgaatctatctattgttttgttagtgatgaagaagttttagct
aaagtcaataaaattaaagctaatactaaattaaaagaagtctattcttttaatcatatt
gaaggctgcaaacattactcagagttatttgaacttggcaaagatgaaactaatcaaaat
gaagttcaagaaagaatggacgctgtatcaccaaacgatttagcaaccataatttatact
tctggaactacaggtaagcccaaaggtgttatgctatcgcataataatataacaagtaat
gctttagatgcatcgcatcgtttaccatttatgaatagtaaagaaaatagaatattaagc
tttcttcctatttgtcatgtattcgagcgtgtactaatttacttataccaatatgccgga
gcttcaatttactttgctgaaggcattgataaaattggtgataacgcaaaagaaataaaa
cctcatttaatgagtgttgtacctagactactagaaaaagtttacgataaaattattgca
aaagccgaagagctatcaggagttaaaaaagcattatttttctgggcagtaaaccttgct
gaaaaatgggaaccttatggagctaatggagcatggtacgagtttaaattaaaaattgca
aacaaacttattttcagtaaatggcgtgaagcacttggtggagaattaaacactatggta
tcaggttctgcagcattacaagtaaggctttctagaattttttctgcagcaggaatgcaa
gtcatgcaaggctatgggttaacagaaacctctccagtaatctctgtagaaatgtacaga
aacaaacattttaaacttggaaccgtaggtaaacctataaaaaacgttgaagtaaaaatt
gctgaagacggagaaatactagtaaaaggccctaatgttatgatgggctattataaagat
ccagaaagaacagatagcgttatgactggtgaatattttcatactggagataaaggtaat
ttagattctgaaggctttttaaaaataacaggtcgtaaaaaagaaatgtttaaaacctct
ggtggtaaatatgttataccaacacttttggagaacgaattaaaacaatctcgatttata
gaacaagtaatggttattggtgaaggtgaaaaaatgcctgcagccatcattcaaccaaat
tttgaatttatagaagattggatagatagaaaaaagaaaaatattggaaaatctggtgaa
gatattgccaattcaaaagaaattatactacgtattcaacaagaagtagacgcttgtaat
aagcactttggtaaatgggaacaaattaaacgttttgaacttacaccagacgtttggtct
atagatagcggtcatttaacaccaaccatgaaaatgaaacgaaccgttataaaagacata
tacaaagaactttacaacaaaatttatagaaactaa
DBGET
integrated database retrieval system
