Lacinutrix sp. 5H-3-7-4: Lacal_2000
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Entry
Lacal_2000 CDS
T01533
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
lan
Lacinutrix sp. 5H-3-7-4
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lan01011
]
Lacal_2000
Enzymes [BR:
lan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Lacal_2000
Peptidoglycan biosynthesis and degradation proteins [BR:
lan01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Lacal_2000
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
AEH01846
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Position
2247078..2248013
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AA seq
311 aa
AA seq
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MMMKHVQKILAGIGLICLAALFINAFQEAPTDENLQKKIINDYNVYALQVPDYLDFAGEP
VPLENPDILERMDKELLVNTYWQSNGLLMFKRAQKYFPIIEPILAKNGIPDDFKYLAVIE
SGLTNAKSPAGASGFWQIMKTTGRENGLEVNSNVDERYHLEKATQVACDYLKKSKERLGS
WTNAAAAYNAGNYGISKRLEAQQVKNYYDLLLGEETGRYVFRIIALKEILSNPSKYGFNF
RSKDLYSNIPTYQVPVDTVVKDFASFAKQFGINYKILKIHNPWLRESKLNNASRKQYFID
IPEKGYYETQP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaaacatgttcaaaaaatactagcaggaataggcttaatttgcttagctgct
ttatttataaatgcttttcaagaagcaccaacagatgaaaatttacaaaagaaaataata
aacgattataatgtttatgccttacaagttccagattacttagattttgctggcgaacct
gtaccattagaaaatccagatattttagaacgtatggataaagaacttttagtaaatacc
tattggcaatctaatggtttattaatgtttaaacgtgctcaaaaatactttcctattata
gagcctattttagcaaaaaatgggataccagacgattttaaatacctagcagtaatagaa
agtggtttaacaaatgcaaaatctccagcaggagcaagtggcttttggcaaataatgaaa
actacaggaagagaaaatggcctagaggtaaacagtaatgtagatgagcgttaccattta
gagaaagcaacacaagtagcttgcgattatttaaaaaaatctaaagagcgtttaggatct
tggactaatgctgcagctgcatacaatgcaggaaattacggtatatcaaaacgtttagaa
gcacaacaagtaaaaaactattacgatttacttttaggagaagaaacaggacgttatgta
tttagaattatagcgctaaaagaaattttatctaacccaagtaaatatgggtttaacttt
agaagtaaagatctgtattctaatataccaacctaccaagtacctgttgatacggtagta
aaagattttgcatcttttgctaaacaatttggcattaattataaaattttaaaaatccat
aatccatggttaagagaaagtaaacttaataacgcctctagaaagcaatactttatagac
attcctgaaaaaggttattatgagacacaaccttag
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