Lacinutrix sp. 5H-3-7-4: Lacal_2157
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Entry
Lacal_2157 CDS
T01533
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lan
Lacinutrix sp. 5H-3-7-4
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lan03400
]
Lacal_2157
Enzymes [BR:
lan01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Lacal_2157
DNA repair and recombination proteins [BR:
lan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Lacal_2157
Prokaryotic type
Lacal_2157
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
AChE_tetra
Motif
Other DBs
NCBI-ProteinID:
AEH02003
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Position
complement(2418004..2419308)
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AA seq
434 aa
AA seq
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MSKTVNIFWFRRDLRLDDNVGFFEALKAEHPVLPIFIFDSEILDELPENDARVSFIFETL
QNMRQTLQDENNSSLAMFYGKPIDIYKSLIKDYNINTVYTNHDYEPYAKERDSEIQSFLE
ENKINFKTYKDQVIFEKNEVVKDDGKPYVVYTPYMKKWKAKFKDYDLKIYYTNTFLNNLI
ENTRLPNLSLSDIGFKKSSQDIKDYTVTPTLIQEYEATRNFPAKDTTSRLGPHLRFGTVS
VRKMVKKATAENNEIFWQELIWREFFMQILWHFPDTHKDAFKAKYDNIKWRNNNKEFKAW
CDGKTGYPLVDAGMRQLNQTGFMHNRVRMLVGSFLCKHLLIDWRKGEAYFAQKLHDYDMA
SNVGNWQWVAGSGVDASPYFRIFNPTTQIDKFDKDKKYIKQWIPEFGTDKYPEKIVDHKE
ARERCLKVYKDAVA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaactgtaaacattttttggtttcgtagagatttaagattagatgataatgtt
ggtttttttgaagcactaaaagccgaacatcccgtactgccaatttttatttttgattct
gaaatattagatgaattaccagaaaacgatgctcgtgtaagttttatttttgaaacattg
caaaacatgaggcaaacattacaagatgaaaataatagcagtctagcaatgttttacggt
aaaccaatagatatttataagtctttaattaaagattataacattaatactgtttacacc
aatcatgattatgagccatacgcaaaagaaagagatagtgaaatacaatcgtttttagaa
gaaaataaaattaactttaaaacttataaagatcaggtaatttttgaaaaaaacgaagta
gtaaaagacgacggtaaaccttacgtagtatacactccatacatgaaaaaatggaaagct
aaatttaaagattatgatttaaaaatttactataccaatacatttttaaataatttaatt
gaaaatacaaggctacctaatttaagtttaagcgatataggttttaaaaaatctagtcaa
gatattaaagactatactgtaactcctactttgatacaagaatatgaagctacaagaaat
tttccagccaaagataccacttcacgtttaggtccgcatttaagatttggcactgtaagc
gttagaaaaatggtaaaaaaagcaactgcagaaaataacgagattttctggcaggaactt
atatggagagaatttttcatgcaaattttatggcattttccagacacacataaagatgca
tttaaagcaaaatacgataatattaaatggcgaaacaataataaagaatttaaagcttgg
tgcgatggaaaaactggctatcctttagtagatgctggaatgagacaattaaatcaaacc
ggctttatgcataatcgtgtgcgcatgctagttggcagttttttatgtaaacacttactt
atagattggagaaaaggcgaagcttattttgcccaaaaacttcatgattacgatatggct
agtaatgtaggtaattggcaatgggttgctggatctggagtagatgcatctccatatttt
agaatatttaatcctactacgcaaatagataagtttgataaggacaaaaaatatataaaa
caatggattccagaatttggtacagataaatacccagaaaaaattgtagaccataaagaa
gctagagaacgctgtttaaaagtttacaaagacgctgtagcataa
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