Lacinutrix sp. 5H-3-7-4: Lacal_2525
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Entry
Lacal_2525 CDS
T01533
Name
(GenBank) Protein of unknown function methylase putative
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
lan
Lacinutrix sp. 5H-3-7-4
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lan03009
]
Lacal_2525
Enzymes [BR:
lan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Lacal_2525
Ribosome biogenesis [BR:
lan03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Lacal_2525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_15
Methyltransf_31
PrmA
FtsJ
TRM
MTS
TRM5-TYW2_MTfase
Methyltransf_25
Methyltr_RsmB-F
Methyltransf_3
Methyltransf_12
UPF0020
UPF0113
Methyltransf_11
MT-A70
Motif
Other DBs
NCBI-ProteinID:
AEH02366
UniProt:
F6GIX7
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All DBs
Position
complement(2805219..2806451)
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AA seq
410 aa
AA seq
DB search
MSLNIKSNTLNYSPKRLAIKLNAKGEQFVLQGHPWVFSDNITKVNTDANSGDLAIIFSKN
KNKVIGLGLYDANSPIRIKMLHSGNTPATIDNTFFKQKIEAAFAKRSGLLQTNTNSYRLL
FGENDGFPGLIADVYAHVLVVKLYSEIWLPYLDGILESLQTVSNAQTIVIRLSRSLEQSK
LHNIKNGAVVYGTLPNEVIQFIEHGVHFSANVIKGHKTGYFLDHRANRKQVGEWSKGKTV
LDVFSYAGGFSVHALANGAKEVTSLDISKQALDIAYQNGKLNNYSGTHKTIADDAFVALK
KLIKNKQTFDVVVIDPPSFAKQQSEIELAKKKYAQLAQLGVQLTAKKGLLVLASCSSRVL
AQTFFDINAQVLRESSRTSDCILKTYHDSDHPIGFPEGAYLKCGYYRFDV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaatattaaaagtaatactttaaattacagccctaagcgattagcaatcaag
ctaaatgcaaaaggggagcaatttgtattgcaaggtcatccttgggtttttagtgataat
attacaaaagtaaataccgatgctaatagtggtgatttagccataatttttagtaaaaat
aaaaacaaagttataggcttaggtttatacgatgctaattctcctattcgtataaaaatg
ttacatagtggtaatactccagccacaatagataacactttttttaaacaaaaaatagaa
gcagcatttgctaagcgtagtggtttattgcaaaccaatacaaacagctaccgcttatta
tttggtgaaaatgatggtttcccaggtttaatagcagatgtttatgcacatgttttagtt
gtaaagttatattctgaaatatggcttccgtatttagatggtattttagaaagcttacaa
actgttagtaatgcacaaactatagtcattagattaagccgaagcttagaacaatcaaaa
cttcataatattaaaaacggagcagttgtttatggtactttacctaacgaagttatacag
tttatagagcatggtgttcatttttcggcaaatgtaattaaaggacacaaaaccggttat
tttttagaccatcgtgctaacaggaaacaagtaggcgagtggagtaaaggcaaaacagta
cttgatgtatttagttacgcaggtggtttttcggtacatgcattagctaatggagctaaa
gaagttaccagtttagatataagtaaacaagcgctagacattgcttaccaaaacggaaaa
ttaaataattactcaggaactcataaaaccattgcagacgatgcctttgtagctttaaaa
aagctaataaaaaacaagcaaacgtttgatgttgtagttatagatccgccaagttttgca
aagcagcaaagcgaaatagaactagcaaagaaaaaatatgcacaattagcacaattaggc
gtacagcttactgctaaaaaaggattattagtattagcttcttgttcatcaagagtatta
gctcaaacgttttttgatattaatgcacaagttttacgcgaaagcagtagaacatcagac
tgtattttaaaaacgtaccacgatagcgaccatcctattggatttccagaaggcgcatat
ttaaaatgtggctattacaggtttgatgtgtaa
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