Lacinutrix sp. 5H-3-7-4: Lacal_2850
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Entry
Lacal_2850 CDS
T01533
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lan
Lacinutrix sp. 5H-3-7-4
Pathway
lan03030
DNA replication
lan03430
Mismatch repair
lan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lacal_2850
03430 Mismatch repair
Lacal_2850
03440 Homologous recombination
Lacal_2850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lan03032
]
Lacal_2850
03400 DNA repair and recombination proteins [BR:
lan03400
]
Lacal_2850
Enzymes [BR:
lan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lacal_2850
DNA replication proteins [BR:
lan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lacal_2850
DNA repair and recombination proteins [BR:
lan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lacal_2850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
DUF896
IL3
UPF0113
UDI
Motif
Other DBs
NCBI-ProteinID:
AEH02688
LinkDB
All DBs
Position
complement(3165727..3166731)
Genome browser
AA seq
334 aa
AA seq
DB search
MDEVKQLVTDIKNNKLAPIYLLMGEEAYYIDKISEFIESNVLAEEERGFNQMVLYGRDVT
VEDIVGNAKRFPMMADKQVVVVKEAQDLSRTIDKLSDYAKNPQPSTVLVLCYKYKSVDKR
KAVYKAIKKSGIVFESKKLYDNQVPDWIRRTLSTKGYKITPKASQMLVEFLGTNLAKINN
ELEKLQIVLPEGSEITPSHIEENIGISKDYNNFELRKAIGARNDAKAFKIITYFGDNPKD
NPMVVTVSLLYNFFSQLLQLHGMNDKSPRSVASALRVNPYFVSEYLDAARNFPMRKVSGI
VATLREFDVKSKGVNANAVPQKDLLKELLVRILN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttggacgaagtaaaacaactggtaacagacataaaaaacaataaactagcacctatttat
ttattaatgggtgaagaagcatattatattgataaaatttcagaatttattgaaagcaat
gttttagcagaagaagaacgtggttttaaccaaatggtattatacggtcgtgatgtaaca
gtcgaagatattgttggtaatgctaaacggtttcctatgatggcagataagcaagtagtt
gttgttaaagaagcacaagatttatctagaactatagacaaactatcagattatgctaaa
aatccacagccatcaactgttttggttttgtgttacaaatataaatctgtagataaacgt
aaggctgtttataaagcaattaaaaaatcgggtattgttttcgagagtaagaagctttac
gataatcaagtaccagattggattagaagaaccttatctacaaaaggttataaaattact
ccaaaggcttcgcaaatgcttgttgaatttttaggtactaatcttgctaaaattaataat
gaactagaaaaacttcaaatagtacttcctgaaggttcagaaattacaccatcgcatata
gaagaaaatataggtattagtaaagattataataatttcgaactacgtaaagctattggt
gcccgcaatgatgcaaaagcatttaaaattataacctattttggtgataacccaaaagac
aacccaatggttgtaactgtttcgctactttataatttcttttctcaattattgcaatta
catggtatgaatgataagtctccacgaagcgtagcttctgcattgcgtgtaaacccatac
tttgtaagcgaatatttagatgctgcacgtaattttcctatgcgtaaagtaagtggtatt
gttgctactttacgtgagtttgatgttaaaagcaaaggtgtaaatgccaatgcagtgccg
caaaaagatttattaaaagagttgttggtaagaattttaaattaa
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