Lupinus angustifolius (narrow-leaved blue lupine): 109324994
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Entry
109324994 CDS
T04664
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang04120
Ubiquitin mediated proteolysis
lang04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109324994
04120 Ubiquitin mediated proteolysis
109324994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lang04121
]
109324994
Enzymes [BR:
lang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109324994
Ubiquitin system [BR:
lang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109324994
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
109324994
NCBI-ProteinID:
XP_019412673
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Position
LG13:556557..561513
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AA seq
552 aa
AA seq
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MDPSKMMRLQTYAGLSLITTMAITYHAFNTRGQFYPAMVYLATSKISLVLLLNMGLVIMC
VLWQLTKKLFLGSLREAEIERLNEQSWREVMEILFAITIFRQDFSVTFLAKVTALLLVKA
LHWLAQKRLEYIETTPSVTKLSHVRIVSFMGFLLLLDSLFLYSSVKHLIITWQPSVSLFF
AFEYMILATTTVSIFVKYIFYVSDMLMDGQWEKKPVFTFYLELIRDLLHLSMYLCFFFVI
FINYGVPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELDVGDATCIIC
REEMTSAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTAAGGQQNSQSDAHQ
HGAGTGSTTQAELGNGVATANFSRHQARLQAAAAAASIYEKSYVYPSATSLACSRGYTQY
PPVQRSVAESSSAEACSSEQTQNQFVIPGGPMNASFPPMGNFNFLPSQTHTAPVNYGEGF
GNVPNMPNSLVEAQRKVLQLQIEILQNQLQLLQKTNVGKSVHEGTSVSDSKGKGIASSSV
VSTHDEIQDSKA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagcaaaatgatgaggcttcaaacatatgctggtcttagtttgattacaact
atggctattacatatcatgcatttaatactagaggccagttttatcctgcaatggtttat
ctagctacttctaagatcagtttggtgcttcttctcaacatgggtttggtaatcatgtgt
gttctatggcagttaaccaaaaagcttttcctcggttcccttcgagaggctgagattgag
aggcttaatgagcaatcatggagggaggttatggaaatcctctttgcaattactattttt
agacaggacttttctgttacatttcttgcaaaggtcacggcgctgttgttagttaaggct
ttgcattggttggctcagaagagactcgagtatatagagaccactccttctgtgaccaag
ttgtctcatgttcgaattgtatcttttatgggtttccttcttcttctagatagcctcttt
ttgtacagttctgtgaagcatttgatcataacttggcagccttcagtttcacttttcttt
gcttttgagtacatgatactcgcaacaactacagtgtcaatttttgtaaaatatattttc
tatgtcagtgacatgcttatggatggacaatgggaaaagaaaccagtcttcaccttttac
ctcgaacttattagggacttgcttcacttgtctatgtacctgtgcttcttttttgtaatt
ttcataaactatggagttcctttgcacttaataagggagctgtacgagacatttaggaac
ttcaaaattcgagttgcggattacattcgatatcgtaagattacttcaaacatgaatgac
cgatttcctgatgccacgcctgaagagcttgacgtaggtgatgcaacctgcattatttgt
cgtgaagagatgacttctgctaagaagcttatatgtggtcatctttttcatgttcattgt
ctgcggtcatggctggaacggcaacatacctgtcctacctgcagagcactggttgtacca
cctgaaaatgggacaacggctgccggaggacagcaaaattcacagtcagatgctcatcaa
catggggcaggcactggaagcacaactcaagccgaacttggcaatggggtggcaactgct
aattttagtcggcatcaagcgagactccaagctgctgccgcagcagcttcaatatatgag
aagtcttatgtgtacccctctgcaacttctttagcatgctcccgtggatacacccaatat
cccccagttcaaagatcggtggctgaatcttcaagtgccgaggcatgcagcagtgaacaa
acacaaaatcagtttgttatccctggtggaccaatgaatgcatcttttcctccaatggga
aacttcaattttctaccttcccaaacacacacagcccctgttaattatggagaggggttt
ggaaatgttccgaatatgccaaactctctggtggaagctcaaagaaaagttctccaatta
cagatcgagattctgcaaaatcagctccaacttttgcagaagacaaatgttggcaagagt
gtacatgaaggcacatcggtatcggatagtaaaggcaagggcatagcttcttcatctgta
gtatctacccatgatgagattcaagacagtaaagcataa
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