Lupinus angustifolius (narrow-leaved blue lupine): 109325033
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Entry
109325033 CDS
T04664
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lang03009
]
109325033
Ribosome biogenesis [BR:
lang03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
109325033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
109325033
NCBI-ProteinID:
XP_019412722
UniProt:
A0A4P1R0D1
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Position
LG13:complement(5637821..5640221)
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AA seq
445 aa
AA seq
DB search
MSPFPSSFDEFILTSSPDGPIVAYEASTGATYTRFSDSRSPRRGLTMVNQGLIAVSHVFS
ETGAGSVQIYNWHISNVFNNFPLPEPVAPLVATSDGAFLFVGGLSGTIHSLSIPSGNLIN
SLSLHSKPISTLHLNDDGSLVISGSNDGVIVMIPSFKLVEEGSYSLAEDDSRDFILHQWK
AHSDSITALKSGVGVCRSTLISCSLDCTCKIWDMSNGVLIQTVAFPYAIFGVAVDSRESR
FYAAGEDGLVYMGSMNRKMIDKGYELFTSSKCHNGSIVSLVLVNEGKDLVSASEDGSVWK
WDVMNGEVTMVLGNNNDKRSMISDMIVAKRDRNYGVIMENDVVGGSEINGFNSSYSSCFS
SSRLYDEKVVTNLMQITDFGQVLDVIVEDKKKAINMLESAIEMYERLLKLILKEAMRGIG
GSNDDEDAEKQGDKEQEEEEKENDK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccatttccttcttcctttgatgaatttatcctcacaagctcccccgacggccct
atcgtcgcctatgaagcttccaccggcgccacctacacacggttcagcgacagtagatca
ccgcgccgtggcctcaccatggttaaccaaggactcattgcagtatctcatgtgttttca
gaaactggtgcaggttcagtccaaatctacaattggcatatttcaaatgtcttcaacaac
ttccctcttcctgaaccagttgcaccactcgttgctacttctgatggtgcttttctcttt
gtgggtggtctctctggaaccattcattctctctcaatcccttctgggaatctcatcaat
tctctttctcttcactcaaaacctatctctactcttcatctcaatgatgatggctcgctt
gtaatatcaggtagtaatgatggggtgatagttatgatcccaagttttaagcttgttgag
gaaggatcttattcattagctgaagatgattcaagagattttatattgcaccagtggaag
gcacattctgattcaatcactgctttgaaatctggggtaggagtttgtagatctacattg
atctcttgctcacttgattgcacatgcaaaatttgggatatgtcaaatggagttctgata
caaacagtggcattcccttatgccatttttggggtagcagtagattcaagagagtcaaga
ttttatgctgctggtgaagatgggttggtttatatgggttcaatgaatagaaaaatgata
gataaagggtatgaattgtttactagttctaaatgtcataatgggtcaattgtgtctttg
gttttggtaaatgaaggtaaggatttggtttctgcttcagaagatggtagtgtttggaaa
tgggatgttatgaatggagaagttactatggttcttggaaataataatgacaagagaagc
atgattagtgatatgatagtggcaaaaagagatagaaattatggagttataatggaaaat
gatgttgttggaggcagtgaaatcaatggctttaattcttcttattcttcttgtttttct
tcttctaggctatatgatgaaaaggtagttacaaatctcatgcaaataacagattttgga
caagtgttggatgtgatagtagaggacaagaaaaaagctattaacatgttagaatctgca
attgagatgtatgagaggctattgaaacttatccttaaagaagctatgagaggtattggt
ggtagtaacgatgatgaagatgcagaaaaacaaggagacaaagagcaagaggaagaagag
aaagaaaatgacaagtaa
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