Lupinus angustifolius (narrow-leaved blue lupine): 109325277
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Entry
109325277 CDS
T04664
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03030
DNA replication
lang03410
Base excision repair
lang03420
Nucleotide excision repair
lang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109325277
03410 Base excision repair
109325277
03420 Nucleotide excision repair
109325277
03430 Mismatch repair
109325277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lang03032
]
109325277
03400 DNA repair and recombination proteins [BR:
lang03400
]
109325277
DNA replication proteins [BR:
lang03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109325277
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109325277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
PTCB-BRCT
AAA_19
Rad17
AAA_5
nSTAND3
RuvB_N
AAA_30
Gp44_lid
BRCT_2
AAA_14
AAA_assoc_2
Sigma54_activ_2
RsgA_GTPase
AAA_16
TsaE
NTPase_1
AAA_33
Zeta_toxin
AAA_18
NPHP3_N
AAA_17
RNA_helicase
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
109325277
NCBI-ProteinID:
XP_019413096
LinkDB
All DBs
Position
LG13:complement(3919747..3929402)
Genome browser
AA seq
956 aa
AA seq
DB search
MSDIRKWFMKSHANVNDSVSKPSSDDKVQPQKTVPGGQESSGSGRRKTSKYFDKDKEKVK
EEKETPKLPAKRKNMKDIEELQIPRPSKKLHEADEDESALPTSYKKLADSTPTKKLKSGS
GRGTPQKSADLEENDEDDDKDKVTPAKSGGRGRGGRGASTPSTGGRGRGGGRGGFMNFGE
RKDPPHKGEKEVPEGAPTCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTSY
LLCDEDIGGRKSEKAKELGTSFLTEDGLFGMIRASKPVKAPLKEEPKKPLTKAVALASQS
KGPPKVEAKISLSSSSPSTQAKPKAATITQSSSMWTDKHRPKSPKDIIGNQSLVSQLRNW
LKAWNEQFLDTGSNKKGGKKQTGSASQKAVLLSGTPGIGKTTSAKLVCQELGFQAVEVNA
SDSRGKADSKIGKGISGSTKNSVKELVTNEALGANMDRSKLSKTVLIMDEVDGMSAGDRG
GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSYRKPTKQQMAKRLMDVAKAEG
LQVNEIALEELAERVNGDMRMAINQLQYMSLSMSVINFDDIRQRFLKNSKDEEISPFTAV
DKLFGFNAGKLKMDERNNLSMSDPDLVPLLIQENYINYRPSGAGKDDSGITRMNLIARAA
ESIADGDIVNVQIRRYQQWQLSQTSSVVSCIIPASLLHGQREILEQGERNFNRFGGWLGK
NSTRGKNMRLLDDLHGHILASRETSPGRDTIRLEYLTLLLQQLTEPLKTLPKAEAVEKVV
EFMNTYSITQEDFDTIVELSKFKGHPNLLEGIPPAVKSALTKAYKEQSKYRMVRAADQVT
LRMVRGSDRVTLPEIKKAPKKRIAAILEPADEGVEQGDGETLDESEDENTSDTEELGTTA
GEKLQSELQSLNSKAVQVQLELKGTGNSSSKKPSAGKGKGASASAQKAGQTSKRKR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatattcgaaagtggttcatgaaatctcatgctaatgtcaatgacagtgtttct
aagccttcttccgatgataaagtccagcctcagaaaacggtgcctggaggccaagaaagt
tcaggttccgggaggaggaagactagtaaatattttgataaagacaaagaaaaggtgaaa
gaagagaaagaaacaccgaagctccctgctaaaagaaagaatatgaaggacatcgaggaa
ttacagataccccgcccttcaaagaaacttcatgaagcggatgaagacgagtctgccttg
cccacatcttataagaagttagctgattccactccgacaaaaaaattaaagagtggatca
ggtagggggaccccccagaaatctgcagatttggaagaaaatgatgaagatgatgacaaa
gataaggttactccagctaaatctggtggtaggggtcggggtggacgaggggcatcgaca
ccatcaactggtggtcggggtagagggggtggtaggggtggatttatgaattttggcgaa
agaaaagatcctccgcataaaggagaaaaggaagtccctgaaggtgctcctacctgttta
gctggcttaacttttgtgatcagtggaacactggacagtttggaacgagaagaagctgaa
gacttgattaaacgccatggtggccgtgttactggatcagtcagcaagaaaacaagttat
ctgttatgtgatgaagacattgggggacggaagtctgaaaaagccaaagagcttgggact
tccttcctcacagaggatggattgtttggtatgattcgtgcatcaaaacctgttaaagct
cctttgaaagaagaacccaagaaacctctgactaaggctgttgcattagcatcccagtca
aaaggtcctccaaaagtagaagcaaagatctctttatcttcatcctcaccttctacccaa
gccaagccaaaggcagcaactatcactcaatcttcttcgatgtggacagataaacatcga
cctaaaagtcctaaggacatcatagggaatcagtcacttgtttcacagcttcgaaattgg
ttgaaagcttggaatgagcaattcctcgacactggtagtaataaaaaaggaggtaaaaag
caaaccggatctgcttcccaaaaagctgtcttgttaagtggaacgcctggcataggaaaa
acaacttcagcaaagttggtctgtcaggagcttggtttccaagccgtagaggtaaatgct
agtgatagccgtggaaaagctgatagcaaaattggaaaaggaattagtggaagcactaag
aattctgtcaaggaacttgtaaccaatgaggcccttggtgctaatatggatcggtcaaag
ctttccaaaactgtgctcattatggatgaggttgatgggatgtcagctggtgataggggt
ggtgttgctgatcttattgctagcatcaagatatcaaaaattcctattatctgcatttgc
aacgaccgttacagccagaaactaaaaagtctcgtgaactactgtttgcttcttagttat
cgaaagcctacaaagcaacagatggcgaagaggctgatggatgttgcaaaggcagagggg
cttcaagttaatgagattgctctcgaggaactagcagaaagagttaatggagatatgcgc
atggcaataaatcagttacaatatatgagcctctccatgtcagttattaactttgatgat
atcaggcagcgctttcttaaaaattcgaaggatgaagagatttcgccatttacagctgtt
gataagctttttggttttaatgctgggaaattgaaaatggatgagaggaataatcttagc
atgagcgatcctgatcttgttcctcttcttatccaggaaaattatattaattatagacca
agcggggctggtaaggatgacagtggtataacacgcatgaacctgattgcccgtgctgct
gagtctattgctgatggggatatagtgaatgtacaaattcgaagatatcaacaatggcag
ctctctcaaactagttctgtcgtatcatgtataattcctgcttcattactgcatgggcaa
agggaaatactcgaacagggagaacggaattttaatcggtttggtgggtggcttgggaag
aactcgacaaggggtaaaaacatgagacttttggatgatcttcatggccacattcttgct
tctcgtgaaactagtccgggaagggatactatacgcttggaataccttactctgcttctt
caacaactgacagaaccactgaaaaccctgcccaaggctgaagctgttgagaaagttgtg
gaattcatgaatacatactctatcactcaggaagattttgatactattgtagagttatca
aaattcaagggtcatcctaatcttctagagggcataccgcccgccgtcaagtcagccttg
acaaaagcatataaggagcaaagcaaatatcggatggtgcgagctgcagatcaagtcact
cttcggatggtgcgaggttcagatcgagtcactcttcctgaaataaagaaggcccctaag
aagcggattgctgctattctagaaccagctgatgaaggagtggaacaaggtgatggtgaa
accttggacgagagtgaagatgagaacacctccgacactgaggagttgggcactactgct
ggggagaagctacagtcggaacttcaaagcttgaattcaaaagctgttcaagtacaattg
gagttgaagggaacaggcaattcaagttcgaagaagccatctgctggtaaaggaaaaggt
gcttctgcatctgcacagaaggctggccaaacatcaaaaagaaaaaggtga
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