Lupinus angustifolius (narrow-leaved blue lupine): 109325723
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Entry
109325723 CDS
T04664
Name
(RefSeq) flowering time control protein FY-like
KO
K15542
polyadenylation factor subunit 2
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109325723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109325723
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109325723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
eIF2A
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_WDR75_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_Vps41
WD_LRWD1
WD40_like
Beta-prop_DCAF12
B-prop_COPA_B_2nd
PROPPIN
WDR54
Motif
Other DBs
NCBI-GeneID:
109325723
NCBI-ProteinID:
XP_019413793
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Position
LG13:complement(6255737..6264536)
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AA seq
713 aa
AA seq
DB search
MMYGDPHNHHHQQQQQQQQQQPPPPPHFQQQQQPGPEFHRGPPPPQMMRQPSASSTNIPP
EFHHPAPGGPHPPHYDVHGDIHGAKRMRKLAQRKAVDYTSTVVRYMQIRMSQRDSRDRTV
LQPTPAAAIDMLPAVGYSDNPSTSFAAKFVHTSINKNRCPINRVLWTPTGRRLITGSQTG
EFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSA
HKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEESSLTGHGWDVKSVDWHPTKSLLV
SGGKDNLVKLWDAKSGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIVKLYDIRAMKE
LESFRGHQKDVTALAWHPFHEEYFVSGSYDGSIFHWLVGHETPQVEVTSAHDNNVWDLAW
HPIGYLLCSGSSDHTTKFWCRNRPGDTVRDRFNNGMQGYAEQNPVPGRVGGNFAMPEGPT
TPGPFPPGLTRNEGTIPGVGVAMPILDVPHGEQIQPHPGSMGAPPLPPGPHPSLLNANQQ
RLYQQNPQQIPQHQHQGLPQQMGPLPMPPNMPQLQHPSQSSMAPYPHLPRPPPQMPLGMP
GPTSHPVPGPMGMQGGMNQMGPPPPMPQGHYGGMNQMHSGSLPPSGGPPVGGFPGNMPNM
QGPPNTGYPQGSFNRPQSGQMPLMQGYNPYQSGNQSGMPPNPQSGAPHSQMPK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacggtgatcctcataaccaccaccaccagcagcagcagcagcaacaacaacag
caaccgccaccgccaccgcattttcagcagcagcagcagccaggtccagaatttcaccgt
ggaccaccgccgccgcagatgatgcgccaaccttctgcttcatcaaccaacatacctcca
gagtttcaccaccccgctcctggtgggccccaccctcctcattacgatgttcatggtgat
atccatggtgcaaaaagaatgagaaagcttgctcaaaggaaggcggttgattatacgagc
acagttgtgcgttatatgcagattcgtatgtcgcaacgagattcaagggacaggacagta
ctccaacctaccccagcagcagcaattgatatgttaccagcagttggctattcagacaat
ccatctacaagctttgctgctaaatttgttcatacatctataaataaaaatcgttgccct
attaaccgtgttctttggactccaacgggacggcgtcttattactggctcacagactggg
gaattcactctctggaatggacagtcttttaattttgaaatgattcttcaggcacatgac
caagcaatcagatccatggtctggagtcacaatgacaactggatggtctctggtgatgat
ggaggcgcaataaagtattggcagaacaacatgaacaatgttaaagccaacaaatctgct
cataaagaatcagtccgtgacttaagtttctgcaggacagatttgaagttctgctcatgc
tccgatgatactactgttaaagtttgggattttgcacgctgtcaagaagagtcttcatta
actggccatggttgggatgtgaagagtgttgactggcatcctacaaaatccctattagta
tcaggtgggaaggacaatcttgtgaaactttgggatgctaaatcgggaaaagaactttgc
tcatttcatgggcataaaaatactgtcctctgtgtcaagtggaatcaaaatggtaactgg
gtattaacagcttcaaaggatcaaatagtaaagctgtatgacataagggctatgaaggaa
cttgaatcattccgtggacatcagaaggatgttactgctttggcttggcatccattccac
gaagaatactttgtcagtgggagttatgacggttccatcttccattggcttgttgggcat
gaaactccacaagttgaagttaccagtgctcatgataataatgtgtgggaccttgcttgg
catcctattggataccttctctgcagtggtagcagtgatcatacaacgaagttttggtgc
agaaataggccaggagacactgttcgtgatagatttaacaatggcatgcaaggatatgct
gagcaaaacccagttcctggtcgtgtgggtggtaactttgcaatgcctgaaggtccaaca
actccaggaccatttccccctgggttgactcgaaatgaaggtaccattcctggtgttgga
gttgcgatgcccatacttgatgtgcctcatggggagcagatacagccccatcctggttca
atgggtgctcctcctcttccaccaggtccacacccctctcttcttaatgccaatcaacag
agactgtaccagcagaatcctcagcagatcccacaacatcaacaccagggactaccacaa
cagatgggtcctttgcctatgcccccaaatatgccacagctacaacacccttcccagtca
tccatggccccttatccacatttgcctcgccctccaccccaaatgccacttggaatgcca
ggtcctacgtcacacccggtgccaggtccaatgggcatgcaaggtggaatgaatcagatg
ggtcctccacctccaatgccacaaggtcattatgggggcatgaatcaaatgcattcagga
tccttgcccccaagtggagggccacctgttggaggttttccaggcaacatgcctaatatg
caagggccacctaataccggctatcctcaaggatcattcaaccgacctcaaagtggacaa
atgcctttgatgcaagggtataatccttaccagtctggaaatcaatctgggatgcctcca
aacccacaatcaggggcaccacactctcaaatgccgaagtag
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