Lupinus angustifolius (narrow-leaved blue lupine): 109326567
Help
Entry
109326567 CDS
T04664
Name
(RefSeq) THO complex subunit 5A
KO
K13174
THO complex subunit 5
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109326567
09122 Translation
03013 Nucleocytoplasmic transport
109326567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109326567
03041 Spliceosome [BR:
lang03041
]
109326567
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109326567
Spliceosome [BR:
lang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109326567
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
109326567
NCBI-ProteinID:
XP_019414808
LinkDB
All DBs
Position
LG14:complement(15579747..15584344)
Genome browser
AA seq
817 aa
AA seq
DB search
MEGYRLMEDGEIEEGSATMPDEQGSTNSEQQRIIDESPYEILQNTKASVENIISELLSIK
REGKSKSHVPELVTQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMY
EKSHYVKAIKACKDFKSKYPDIDLVPEDRFFRDAPQDIKDSVVSNDSAHNLMLNRLTFEL
FQRKGLCKLHEKLEQQKKSLLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGVLHTKKL
KQHHSAELLPPALYVIYSQLLAQKEAFREPIDVEIIGSLKDAQTFARNQAHKDTGIPTNV
DSSKLEDDAPDEEEDGQRRRKRPKRVQGKDSADRAGVFQVHPLKITIHVYDDEASDPKPA
KLITLKFEYLVKLKVVCVGIEGTNDGSENDILCNLFPNDTGNELPHQSAKLFVGDDILFD
SQRASRPYKWAQHLAGIDFLPEVSPLLLAGRETSDNGEAARGEDVISGLSLYRQQNRVQT
VLQRIRSRRKSQLALLEQLESLSKLEWPLLSCKSVPWALHSPLCNLVGWSVIRALPVPSE
ASSVAVTDKEEHVQESMDVDVIECPGDTKDELESITEDGELPTLRPNMSKFDHSKQLSLI
SKSITPLNKVRSQSFKKSDDNSDFLLDIESDLDEPAQVEREDESMSNYCVKKSVSWMDYG
VKEFSLVLRRKISADERNVNLEAKIKISMEYPLRPPLFALGLCCISSGENHKGKDGLEWY
NELRAMEAEVNLHMLKMLPNDQQNYVLAHQVCCLAMLFDYYLKDAYPSSERINCTSVFDV
GLCNPISGRFLSRSFRGRDHRKMISWKDMKFTSNCPE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatcgattaatggaagacggtgaaatagaggaaggttcagccactatgcca
gatgaacaaggatctacgaattccgaacaacaacgtattatcgatgaatcgccctacgaa
attctccaaaacacaaaagcttccgttgagaacataatctctgaattgctttctattaag
agagagggtaaatcaaaatcacacgttccagaactcgttactcaaatgttccttcacttc
atcactctccgccaggcaaataggtctatattgcttgaggaggatcgtgtgaaaacggaa
acagagcgtgcgaaagcgcctgtggattttacaacattgcagcttcataaccttatgtat
gagaaaagtcactacgttaaagcaatcaaagcttgcaaagactttaaatccaagtatcct
gacattgaccttgttcctgaagatcgattcttccgtgatgctcctcaggatattaaggat
tctgttgtgtcaaatgacagtgctcataatctgatgcttaataggctaacttttgagtta
ttccagcgcaaagggttgtgcaagcttcatgaaaaactggaacagcaaaagaaaagcctt
ttggagactattgcaaaccggaagaagttcctgacaagtcttccttcacatctcaagtct
cttaagaaagcatcattgcctgtacaaaaccaactaggtgttctgcatactaagaaacta
aagcagcatcattctgcagagttgcttccaccggctctttatgtgatttactcacagctg
ttggctcaaaaggaggcctttagagaacccattgatgtggagattattggaagcctgaaa
gacgctcaaacttttgctcgcaatcaagctcacaaggacactggcattcccaccaatgtg
gatagttccaaattagaagatgatgctcctgatgaagaggaagatggtcagagacggaga
aaaaggccaaaacgggttcaaggcaaggatagtgctgaccgagcaggagtattccaagtt
cacccacttaaaatcactattcatgtgtatgatgatgaggcttctgatcctaagcctgca
aaactcattactcttaagtttgagtacttggtaaagttgaaggttgtatgtgttggaata
gaaggaactaatgatggttctgagaatgacatcttatgcaatttattccccaatgataca
ggaaacgagcttcctcaccagtcagccaaactctttgttggggatgatatactgtttgat
agccagagagcatcacgtccttacaagtgggctcaacacctggcaggaattgatttcttg
cctgaggtgtctcccttgcttcttgctggtcgtgaaacttcagacaacggtgaagcagcg
aggggtgaagatgttatatctggtctttcattatatcgtcagcagaaccgtgtacagaca
gttttacagagaattcgctcaaggagaaaatctcagttggctcttctggaacagctagaa
tctctttcaaagcttgagtggcctcttctatcctgcaaaagtgttccatgggctttgcac
agtcctttgtgcaatttggttggttggtcagtcattagagccttacctgtacctagtgag
gcttcatctgtagctgtcacagacaaagaagagcatgttcaggaatctatggatgttgat
gtaattgaatgtcctggtgatacaaaggacgaactggagagtataacggaagatggagag
cttccaactttgcgtcccaacatgtctaaatttgaccactcaaagcaactgagcttaatt
tctaaaagtattactccgctcaataaagttagatcacaaagtttcaaaaagtctgacgat
aattctgacttcttactggatatcgaaagtgatcttgatgagcctgcacaagttgaacga
gaggatgaaagtatgtccaattactgtgtcaaaaaatctgtctcatggatggattatggg
gtcaaggaattttccctagttctaaggagaaaaatcagtgcagatgagaggaatgtaaat
ttagaggccaagatcaagatcagtatggaatatcctttaagacctcctctttttgcattg
ggtctttgctgcatatcttctggcgaaaaccataaggggaaagatggactagagtggtac
aatgaacttcgtgctatggaagcggaggtcaaccttcacatgctgaagatgctaccaaac
gatcaacaaaactatgtattggcccatcaagtgtgttgtcttgctatgttgtttgactat
tatttgaaagatgcatacccatcatctgaaaggataaattgtacttctgtgtttgatgtt
ggcttatgcaaccctattagtggtaggtttctctctagatcttttagaggaagggatcac
aggaagatgatatcctggaaagacatgaaattcacatcaaactgccccgagtag
DBGET
integrated database retrieval system
