Lupinus angustifolius (narrow-leaved blue lupine): 109326803
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Entry
109326803 CDS
T04664
Name
(RefSeq) regulator of nonsense transcripts UPF2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109326803
03015 mRNA surveillance pathway
109326803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109326803
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109326803
mRNA cycle factors
P-body specific factors
109326803
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Vps8_C_schizo
Motif
Other DBs
NCBI-GeneID:
109326803
NCBI-ProteinID:
XP_019415171
LinkDB
All DBs
Position
LG14:885312..906307
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AA seq
1197 aa
AA seq
DB search
MDHHEDECRIEGQSTSKQDDEEAVARLEEIKKSIEAKMALRQSNLNPERPDAGFLRTLDS
SIKRNTAVIKKLKQINEEQRDALMDELRGVNLSKFVSEAVASICDAKLRSSDIQAAVQIC
SLLHQRYKDFVPSLIQGLLKVFSPGKPGDEPDADKNLKAMKKRSSLKLLLELYFVGVIED
GGIFINTIKDLTSAEQLKDRDATQTSLTLLSSFARQGRIFIGLSVTGPEIHEEFFKGLNI
TTDQKKVIRKACYSFYDTAAELLQAEHSSLRLMEHENSKILNAKGELSDENITSYEKLRK
SYDQLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEATSSGAGKDSPVAEPIWDDEDTR
AFYECLPDLRAFVPAVLLGETELKISEQSAKSQDQPTEIVPESDKGQLATYESGEVSTES
NALPEGESTERVKDKEEKEKSKELDKEKEKEKDNDKKGEHEKDKLKSLEGTNLDALLQRL
PGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDI
STFLLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPASFVFICLKACLDDFT
HHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTSVENAYYLCK
PPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSECEPYLLKCFMKVHK
GKYGQIHLLASLAAGLSRYHDEFAVAIVDEVLEEIRLGLELNDYGMQQRRIAYMRFLGEL
YNYEHVDSSVIFETLYLILIYGHGTPEQDALDPPEDFFRIRLIATLLETCGHYFDRGSSK
RKLDRFLIHFQRYILSKGALPLDVEFDLQDMFADLRPNMVRYTSIEEVNAALVELEEHDH
IVSVDKVSSEKHSDAEKPPSRASSKNVVGDGQSIDNGAEENGVRGDANDSDTDSQSDAVD
VEVHDDEDLDEENHDDGCETEDEDDDGDNGLVPASDDEDEVHVRHKMTEVDPLEEAKFDQ
ELKALVKESMEERSRDLRGRPTLNMMIPMNILEGSTKDHHGRGISVESGDEALDDESGEN
KEVQVRVLVKRGNKQQTKQMFIPQNSSLVQSTKQKEAAELQEKEDIKRRVLEYNDREEEE
LNGLGTQPTNWLQSSHIFLVSGGLEHDPLAMQRAVVCGEMCTMSWFPDLSCDMQDCW
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcacgaggatgaatgccgcatcgaaggccaaagtactagcaaacaagatgac
gaggaagctgttgctcgcctcgaggaaataaaaaaatcaattgaggctaagatggcttta
cgtcaaagcaatttgaaccccgagaggcctgacgcaggatttttaaggactctggattct
agcattaagcgcaacactgcagttatcaagaaactgaagcagattaatgaagagcagcgt
gatgcactgatggacgagttacgaggtgtcaacttaagcaaatttgtcagtgaagctgtg
gcatctatatgtgatgccaagcttagaagttcagatatacaagcagcagttcagatctgc
tctttgcttcatcaaaggtacaaggactttgtgccaagcctgattcaagggcttctcaaa
gtcttctctcctggaaaacctggtgatgaaccagatgcagataaaaacttgaaggcaatg
aagaagcgcagtagtctgaaacttctgttggaactttattttgttggagttattgaagat
ggtggcattttcattaataccataaaggatcttaccagtgcagaacagctaaaagatcgg
gatgctacacaaacaagtttgaccctactttctagctttgctcggcaagggagaattttt
ataggactttctgttactgggccagaaattcatgaggagttttttaaaggtcttaacatc
acgacagatcaaaagaaagttatacggaaagcatgttattcattttatgatactgcagct
gaactacttcaggctgagcattcttcacttcgactaatggagcatgaaaattctaaaatt
cttaatgcaaaaggagagctcagtgatgaaaatatcacttcatatgaaaagcttcgtaaa
tcgtatgaccagttataccgtaatgtctcatcattagcagaagcgcttgatatgcagcct
cctgtgatgcccgaggatggccacacaacaagggttactagtggtgaggaggctacttct
tctggtgctgggaaagattctcctgtcgctgaacctatatgggatgatgaagatacaagg
gctttctatgaatgtttacctgatcttagagctttcgttcccgctgtgcttttgggagaa
acagagctaaaaatcagtgagcaatctgcgaagagtcaagaccaaccaactgaaattgta
cctgaatcagacaaaggtcaactagccacctatgaaagtggagaggtctccacagagtct
aatgctttgccagagggagaaagcacagaaagagtgaaggataaggaagaaaaagaaaag
tctaaagaattggacaaagagaaggaaaaagaaaaagataatgacaaaaagggggaacat
gaaaaagataaactcaaaagtcttgaagggacaaatttggatgctttactgcagaggctt
ccgggttgtgtgagccgggaccttatagatcaattgactgtagaattctgttatctaaat
tcaaaatcaaatcggaaaaaacttgtgagggctttgttcaatgtaccgaggacatctctg
gagcttctaccatattactcacgcatggttgccacactctcaacttgcatgaaggatatc
tctacatttctcttgcagatgttggaggaggagttcaacttcttaataaataaaaaggac
cagatgaacattgagactaagataaggaatatcaggttcattggagaactttgcaagttc
aaaattgcccctgctagctttgttttcatttgtttgaaggcctgtttagatgattttact
catcacaacattgatgtagcttgcaatcttcttgaaacatgtggccgttttctatatcgg
tctccagaaactactatacgtatggctaacatgttggaaatactaatgcgcttgaaaaat
gtgaaaaacttggatcccagacacagtacttcagtggagaatgcatactatctttgcaag
ccaccggaaagatctgcacgagtagctaaagttcgtcctccattgcatcagtatatcaga
aaattacttttctctgatctcgataagtctaccatcgagcatgtgctgaggcaacttcgt
aaattaccatggagtgaatgtgaaccatatcttttgaaatgcttcatgaaggtccacaaa
gggaaatatggtcagatccacctgcttgcttctcttgctgctgggttaagtcgctatcat
gatgagtttgcagtagctattgttgatgaggttttggaggagattagacttgggctagaa
ttaaatgactatgggatgcagcaaagacgcattgcctacatgcggttcttaggggagctt
tacaactatgaacatgtagactcatctgttatttttgagacactatatctcattcttata
tatggtcacgggacaccagagcaagatgcactggatccacctgaagatttttttcgtata
cggttgattgctacccttcttgaaacttgtgggcattactttgaccgaggctcttctaag
aggaaacttgatcggttccttatacacttccagaggtatattttaagcaaaggtgcattg
cccctggacgtcgaatttgacttgcaggatatgtttgcggacttgcgccctaatatggtt
cgatacacatctattgaggaagtgaatgcagctctagtagaacttgaggaacatgatcat
atagtttccgtggataaggtcagcagtgaaaaacattctgacgctgagaaacctccaagt
agggccagttccaaaaatgtggtaggtgatggacagagcattgataatggtgcagaagaa
aatggagtacgaggtgatgctaatgatagtgacactgattcacagagtgatgcagtcgat
gtagaggttcatgatgacgaagatttggatgaggagaatcatgatgatggttgtgagacc
gaggatgaagatgatgatggtgataatgggcttgtacctgcttctgatgatgaagatgaa
gtccatgtaagacacaagatgacagaggtggaccctctcgaggaagctaagtttgatcag
gagctcaaggctttagtaaaggagagtatggaagagcgaagccgggatctacgtggccgt
cctacactgaatatgatgattccaatgaatatacttgagggatccaccaaggatcatcat
gggagaggaattagtgtggaaagtggtgatgaggcattggatgatgagagtggtgaaaac
aaagaggttcaggtgagagttctcgtgaagcgtgggaacaagcaacaaacaaagcagatg
ttcatcccacagaattcctcactggtgcagagtacaaaacagaaagaagcagctgagctt
caagagaaagaggacattaagaggcgtgttttggagtacaatgatagagaagaggaagag
cttaatggattagggacccagccaactaactggctgcaaagttcacatatcttcttggtc
agtggcggcttagaacatgatccgttggcgatgcaacgagctgtggtctgtggagagatg
tgcacaatgtcgtggtttcctgacctaagctgtgacatgcaggattgttggtaa
DBGET
integrated database retrieval system
