Lupinus angustifolius (narrow-leaved blue lupine): 109326995
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Entry
109326995 CDS
T04664
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109326995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109326995
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109326995
mRNA degradation factors
5'-3' decay
Lsm complex
109326995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
109326995
NCBI-ProteinID:
XP_019415499
UniProt:
A0A4P1R082
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All DBs
Position
LG14:complement(1392923..1396549)
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AA seq
131 aa
AA seq
DB search
MNPMSWATPDDELLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIV
GDLYCDVPLGLYVIRGENVVLIGELELGKEELPPHMACVSEAEIRKAQRADRESSDLKGT
MRKRMEFLDFD
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaatgtcttgggctaccccagatgatgaattactctctacctctctagccaca
taccttgacaaaaaacttcttgtcctgttgcgagatggtcgaaaacttctggggttatta
cgctcttttgatcaatttgctaacgtagttcttgaaggtgcatgtgaacgagtaattgtt
ggtgatctttattgtgatgtacctttaggcctatatgtaattcgtggggaaaacgttgtc
ttaattggagagctggaattgggcaaggaggagcttccaccacatatggcttgtgtgtca
gaggccgagataagaaaggctcaaagggctgacagagaatccagtgatctaaagggcacc
atgaggaaaaggatggagttccttgattttgattaa
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