Lupinus angustifolius (narrow-leaved blue lupine): 109327738
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Entry
109327738 CDS
T04664
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
KO
K15172
transcription elongation factor SPT5
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109327738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109327738
03019 Messenger RNA biogenesis [BR:
lang03019
]
109327738
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109327738
RNA polymerase I system
109327738
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
109327738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW2_Spt5
Spt5-NGN
KOW6_SPT51-2
KOW
KOW4_SPT5
KOW7_SPT5
KOW5_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF4438
ProQ_C
Motif
Other DBs
NCBI-GeneID:
109327738
NCBI-ProteinID:
XP_019416440
LinkDB
All DBs
Position
LG15:complement(16309142..16322150)
Genome browser
AA seq
1175 aa
AA seq
DB search
MVCSETKIEEKRKSYNVVETGKINVEAEIIRLRLPSLRFLWTRSLALKAFEKRALSTSSI
IEPTNSTTTLIRKAGPQFKICSNLVILLLQLLLLLLLPYIYGSLAHSITQRLIITLTSEE
NEQLGFSLLLFCGTVFVSRRGMDDDEFDDEEEEEQVADFNEVEEEEEVEERGGVGGRKRR
RSGFIDEDAEEDDEDEEEEDDDDDEDFDGRGGGGRKRQRKKKNAASFFDEEAAVDSDEEE
EEEEGEDDFIVDGGADLPEEHDGRNVRRGRMLPHDEEDHEDLEAVAKSIQERYGRRQAEY
DEEATDVEQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSVIALDHL
KNYIYVEADKEAHVREACKGLRNIFGQKITLVPIREMTDVLSVESKAIDLARDTWVRMKI
GTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVVKKKAFVPPPRFLNVEEA
RELHIRVEHRRDAYGERFDAIGGMMFKDGFLYKTVSIKSISAQNIKPTFDELEKFRKPGE
NGDGDVASLSTLFANRKKGHFLKGDAVIVIKGDLKNLKGWVEKVDEDNVHIRPEIKGLPK
TLAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVEQHVLILISDTTKEHIRVFADDVV
ESSEVTTGVTRIGDYELRDLVLLDNMSFGVIIRVESEAFQVLKGVPDRAEVVLVKLREIK
CKLDKKISVQDRFKNTVSAKDVVRIIEGPCKGKQGPVEHIYRGILFICDRHHLEHAGFIC
VKAQSCVVVGGSRSNGDRNGDASSRFASLRTPTRIPQSPSRFSRGGPPNHSGGRGRGGRG
HDGLTGSTVKVRQGPYKGYRGRVIEVKGTSVRVELESQMKVVTVDRNHISDNVAVTPYRE
SRYGMGSETPMHPSRTPLHPYMTPMRDPGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWE
DGNPGSWGASPQYQPGSPASRPYDAPTPGAGWASTPGGNYSEAGTPRDSSAYANAPSPYL
PSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDMMSPVLGGDNEGPWFMPEILVNVHKP
GEESVGVIRELLPDGSCRVALGSSGDGDTITALPSEMEAVVPRKSDKIKIMGGALRGATG
KLIGVDGTDGIVKVDDTLDVKILDLVILAKLAPSS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggtttgctcagagaccaagattgaagaaaaacgaaaatcatacaatgtggtggaaact
ggaaagattaacgtagaagctgagatcataaggctaaggttaccgagtctcagatttttg
tggacacggtccttggccctaaaagcttttgaaaaacgagcactttcaacttcatccatc
attgaaccaacaaatagcaccaccactttgataagaaaagcaggtccacagtttaaaatt
tgttctaatttagtaattttacttttacagcttttgctgttattgctgttaccatatatc
tatggaagtctcgcacacagcatcacccaacgccttatcatcactctcacatcagaagag
aacgaacagttagggttttctcttctcttgttctgcggcaccgtcttcgtgagtcgccga
ggaatggacgacgacgaattcgacgacgaggaggaggaagagcaggtcgccgatttcaac
gaggtggaggaggaggaggaggtggaggagagaggtggcgttggcggaaggaagaggagg
agatctggcttcattgacgaagatgcggaggaggacgatgaggatgaagaggaagaggat
gatgatgatgatgaggatttcgatggcagaggtggtggtggaaggaagcgccagcgcaag
aagaagaacgctgcttcgttctttgatgaagaggctgctgttgattctgatgaggaggag
gaagaggaggaaggagaggatgacttcattgttgacggtggagctgatcttcctgaggaa
catgatggcagaaatgtgcgtcgtggtcgtatgttgccacatgatgaagaagatcatgaa
gatcttgaagctgtggcaaaaagcattcaagaaaggtatggaaggcgccaggcagagtat
gatgaagaagctactgatgtagaacagcaagctcttttgccatctgtgagagatccaaag
ctctggatggtgaaatgtgcgattggtcgtgagcgggaaacggctgtttgccttatgcaa
aagtacatagataaggggtctgaattgcaaattaggtcagttattgctctcgatcatctc
aaaaactacatatatgtggaagcagataaagaggcacatgtgagagaggcttgcaaaggt
ctacgcaacatatttggccaaaaaataactcttgttccgatcagagaaatgactgatgtc
ctgtcagttgaaagcaaagctattgaccttgccagagatacttgggtcagaatgaaaatt
ggaacatataaaggggaccttgccaaagttgtggatgttgacaatgtgcggcagagagtt
acagtgaagctaattccaaggatagacttacaggcccttgcaaacaaattggaaggtaga
gaagttgtaaagaagaaggcatttgttcctcctcctcgttttctaaatgttgaagaagcc
agggaactgcacatccgtgtggagcatagacgtgatgcctatggggagcgatttgatgca
attggaggcatgatgttcaaggatggttttttatacaaaacagtatcaataaaatccatt
agtgctcagaacatcaaacctacatttgatgagcttgaaaaatttcgcaaaccgggtgag
aatggagatggtgatgtagctagtctgtcaactttatttgcaaacagaaagaaagggcat
tttttgaaaggtgatgctgtaatcgttatcaagggtgatttaaagaatttgaaggggtgg
gtggagaaagttgatgaagataatgttcatataaggccagaaattaagggtcttccaaaa
actcttgctgtaaatgaaaaggaactgtgcaaatattttgaacccggaaaccatgttaag
gttgtttctggtgctcaagagggtgcgactggcatggttgtgaaggtggagcagcatgtc
ctgatcttaatatctgatacaacaaaggaacatatccgtgtgtttgccgatgatgttgtg
gagagttctgaagtgaccactggagttacaagaattggggactatgaacttcgtgatctt
gtactactcgataatatgagctttggtgtgataatacgtgtagaaagtgaggcatttcag
gttcttaagggtgtccctgaccgagctgaagttgtgcttgttaaattaagagagatcaaa
tgtaagttagataagaaaatcagcgtgcaagacagattcaaaaacacagtatcagcaaaa
gatgttgtgcggattattgagggtccctgcaaaggcaaacaaggtcctgtggagcacata
tatagaggaatcttgttcatctgtgatcgtcatcatcttgaacatgccggctttatatgt
gttaaggctcaatcatgtgtagttgtgggaggttcacgctccaatggggacagaaatggt
gatgcctcctcgagatttgccagccttagaacccccactcgtattccacagtccccgagt
aggttttctcggggagggcctccaaatcattctggaggaaggggcagaggtggaaggggg
cacgatggtctgacaggttcaacagttaaagtacgccagggtccctacaaaggttatcgt
gggcgtgttatagaagttaaaggcacatcagttcgggttgaattggagtcccaaatgaag
gttgtgactgttgaccgcaatcatatatctgacaatgtggctgtaactccatatcgtgaa
tctcgatacgggatgggaagtgaaaccccgatgcatccttctagaactcccttacatcca
tatatgactcctatgagagatcctggagcaacccctattcatgatggaatgagaacacct
atgcgtgaccgagcatggaatccttatacaccaatgagtcctccgagggataactgggaa
gatggaaatccaggctcttggggagcaagtccacagtaccaaccaggaagccctgcttca
cggccatatgatgctccaactcctggtgctggttgggccagcactcctggtggcaattat
agtgaggctgggactccccgggacagttctgcctatgccaatgctccaagtccatattta
ccatcaacacctggcgggcagcctatgacaccaaattcagcgtcttatcttcctggcacc
cctggaggacagcctatgactccaggaactggtggtctggacatgatgtccccagtttta
ggtggggacaatgaaggcccttggtttatgccagagatattagtcaatgtacacaagcct
ggagaggagtcagttggagttatacgagagcttcttccggacggatcttgcagggtagct
ctgggatctagtggagatggtgacacaataacagcccttcccagtgaaatggaagctgta
gtaccaaggaaatcagacaaaataaaaatcatgggtggtgcattgcgtggtgccacaggc
aagttgattggtgttgatggtactgatggtattgtaaaagtagatgacacattggatgtc
aagattttagacttagttattttggcaaaattagctccatcttcataa
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