Lupinus angustifolius (narrow-leaved blue lupine): 109328080
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Entry
109328080 CDS
T04664
Name
(RefSeq) regulator of nonsense transcripts UPF2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109328080
03015 mRNA surveillance pathway
109328080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109328080
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109328080
mRNA cycle factors
P-body specific factors
109328080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Cytomega_UL84
ADH_Fe_C
Xpo1
Motif
Other DBs
NCBI-GeneID:
109328080
NCBI-ProteinID:
XP_019416885
LinkDB
All DBs
Position
LG15:complement(2617205..2637342)
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AA seq
1187 aa
AA seq
DB search
MDHHEEECHIEGERTSKQDDEEAVARLEELKKSIEAKMALRQSNLNPERPDAGFLRTLDS
SIKRNTAVIKKLKQINEEQRDALMDELRGVNLSKFVSEAVAAICDAKLRSSDIQSAVQIC
SLLHQRYKDFVPSLIQGLLKVFSPGKSGDESDADKNLKAMKKRSSLKLLLELYFVGVIED
GGIFINIIKDLTSAEQLKDRDATQTSLTLLSSFARQGRIFIGLSVTGPEIHEEFFKGLSI
TADQKKVIRKACYSFYDTAADILQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRK
SYDQLYRNVSSLAEALDMQPPVMPEDGHTTRVTSGEEAISSGAGKDSSIVEPIWDDEDTR
AFYECLPDLRAFVPAVLLGETEPKVSEQSAKSQDQPTEIVLESDKDLLATYESGEASTDS
STLPEGESTEKVKDKEEKEKSKELEKEKSKELDREKEKEKDIDKKGENEKDKLRTLEGTN
FDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVAT
LSTCMKDVNTILLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPASFVFSCL
KACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTSV
ENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSECEPYLL
KCFMKVHKGKYGHIHLLASLAAGLSRYHDEFAVAIVDEVLEEIRLGLELNDYGMQQRRIA
YMRFLGELYNYEHVDSSVIFETLYLILIYGHGTPEQDVLDPPEDCFRIRLNVTLLETCGH
YFDRGSSKRKLDRFLIHFQRYILSKGALPLDVEFDLQDMFADLRPNMVRYTSIEEVNAAL
VELEEHDRTVSEKSPRSSKFAVGDGQSIDNGAEENGVQDDANDSETDSQSDTVDVEGHDD
EELDEENHDDGCETEDDDDDDGPGPASDYEDEVHVRHKMTEVDPLEEANFDQELKALVKE
SMEERSRDLRGRPTLNMMIPMNVLEGSTKDHHGKGIGGESGDEALDDESGGNKEVQVRVL
VKRGNKQQTKQMFIPQNSSLVQSTKQKEAAELQEKEDIKRRVLEYNDREEEELNGLGTQP
SNWLQSGGSKAGGRGHTLEGTSGRGGGSRHRQHNYHTGSGLYYSRRR
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcacgaggaagaatgtcacatcgaaggtgaaaggactagcaaacaagatgat
gaggaagctgttgctcgccttgaggaattaaaaaaatcaattgaggctaagatggcttta
cgtcaaagcaatttgaaccctgagaggcctgatgcaggatttttaaggacattggattcc
agcattaagcgcaacactgcagttattaagaaactgaagcagataaatgaagagcagcgt
gatgcactgatggacgagctacgaggtgtcaacttaagcaaatttgtcagtgaagctgtg
gcagctatatgtgacgccaagcttagaagttcagatatacaatcagcagttcagatctgc
tctttgcttcatcaaaggtacaaggacttcgtaccaagcctgattcaagggcttctcaaa
gtcttctctcctggaaaatctggtgatgaatctgatgcagataaaaacttgaaggcaatg
aagaagcgcagtagtttgaaacttctgttagaactttattttgtcggggttattgaagat
ggtggcatttttatcaatatcataaaggatcttaccagcgcagaacagcttaaagatcgg
gatgctacacaaacaagtttgaccctactttcaagctttgctcggcaagggagaattttt
ataggactttctgttactgggccagaaattcacgaggagttttttaaaggtcttagcatc
acggcagatcaaaagaaagttattcggaaagcgtgttattcattttatgataccgcagct
gatatacttcagtctgagcattcttcacttcgactaatggagcatgaaaattctaaaatt
cttaatgcaaaaggagagctcagtgacgaaaatattgcttcatatgaaaagcttcgtaaa
tcctatgaccagttgtaccgtaatgtctcatcattagcagaggcgcttgatatgcagcct
cctgtgatgccagaggatggtcacacaacaagggttactagtggtgaggaggctatttct
tctggtgctgggaaagattcttctatcgttgaacctatttgggatgatgaagatacaagg
gctttctatgaatgtttacctgatcttagagcttttgttcctgctgtgcttttgggagaa
acagagccgaaagtcagtgagcaatctgcgaagagtcaagaccaaccaactgaaattgta
cttgaatcagacaaagatctactagccacctatgaaagtggagaggcctctacagactct
agtactttgccagagggagaaagcacggaaaaagtgaaggataaagaagaaaaagaaaag
tctaaagaattggagaaagaaaagtctaaagagttagacagagagaaggaaaaagaaaag
gacattgacaaaaaaggggaaaatgaaaaagataaactcagaactcttgaagggacaaat
tttgatgctttattgcagaggcttccgggttgtgtcagccgagaccttatagatcaattg
actgtagaattctgttacctaaattcaaaatcaaatcggaaaaagcttgtgagggctttg
ttcaatgtaccgaggacatctctggagcttctaccatattactcacgcatggttgccaca
ctttcaacttgtatgaaggatgtcaatacgattctcttgcagatgttggaggaggagttc
aatttcttaataaataaaaaagaccagatgaacattgagactaagataaggaatatcagg
ttcatcggagaactttgcaagttcaaaattgcacctgctagctttgttttcagttgtttg
aaggcctgtttagatgatttttctcatcacaacattgatgtagcttgcaatcttcttgaa
acatgtggccgttttctatatcggtctccagaaactactatacgcatggctaacatgttg
gaaatactgatgcgcttaaaaaatgtgaaaaacttggatcccagacacagcacttcagtg
gagaatgcatactacctttgcaagccaccggaaagatctgcacgggtagctaaagttcgc
cctccattgcatcagtatattagaaaattacttttctctgatcttgataagtctaccatc
gagcatgtgctgaggcaacttcgtaagttaccatggagtgaatgtgaaccatatcttttg
aaatgcttcatgaaggtccacaaagggaaatatggtcatatccacttgcttgcttctctt
gctgctgggttaagtcgctatcatgatgagtttgcagtggctattgttgacgaggttttg
gaggagattagacttgggcttgagttaaatgactatgggatgcagcaaagacgcattgcc
tacatgcggttcttaggggagctttacaactatgagcatgtagattcatctgttattttt
gagacattatatctcattcttatatatggtcacgggacaccagagcaagatgtactggat
ccacctgaagattgttttcgtataaggttgaatgttaccttacttgaaacttgtgggcat
tactttgaccgtggctcttctaagaggaaacttgatcgattccttatacacttccagagg
tatattttaagcaaaggtgcattgcccctagacgtcgaatttgacttgcaggatatgttt
gcagacttgcgccccaatatggttcgatacacatccattgaggaagtgaatgcagctcta
gtagaacttgaggaacatgatcgtacagtttctgagaaatctccacgtagttccaagttt
gcagtaggtgatggacagagcattgataatggtgcagaggaaaatggagtgcaagatgat
gctaatgatagtgagacagattcacagagtgacacggttgatgtagagggtcacgacgac
gaagagttggatgaggagaatcacgatgatggttgtgagaccgaggatgatgatgatgat
gatggacctggacctgcttctgactatgaagatgaagtccatgtgagacacaagatgaca
gaggtggaccctctggaagaagccaattttgatcaggagctcaaagctttagtaaaggag
agtatggaagagcgaagccgggatctgcgaggacgtcctacactaaacatgatgattcca
atgaatgtacttgagggatccaccaaggatcatcatgggaaaggaattggtggggaaagt
ggtgatgaggcgttggatgatgagagtggtggaaacaaagaggttcaggtgagagttctt
gtgaagcgtgggaacaagcaacaaacaaagcagatgttcatcccacagaattcctcactg
gtgcagagtacaaaacagaaagaagcagctgagcttcaagagaaagaggacattaagagg
cgtgttttggagtacaatgacagagaagaggaggagcttaatgggttagggacccaacca
agtaactggctgcaaagtggaggtagcaaagcaggtggccgtggacacactttggaagga
accagtggcaggggtggtggatcacgacatcgacagcataattatcatactggcagtgga
ctctactatagcagaagaaggtga
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integrated database retrieval system
