Lupinus angustifolius (narrow-leaved blue lupine): 109328126
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Entry
109328126 CDS
T04664
Name
(RefSeq) uncharacterized LOC109328126
KO
K06100
symplekin
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109328126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109328126
03019 Messenger RNA biogenesis [BR:
lang03019
]
109328126
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109328126
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109328126
U7-dependent histone pre-mRNA processing factors
109328126
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Myotub-related
CRM1_C
Motif
Other DBs
NCBI-GeneID:
109328126
NCBI-ProteinID:
XP_019416971
LinkDB
All DBs
Position
LG15:18476774..18493044
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AA seq
1335 aa
AA seq
DB search
MAAPTRDQALSLLAAANNHGDVNVKTSSLKQAKDILLSVEPSIAAELFPYLLDLQSSPEC
LLRKLLIQVIEEIGFKAVEHTPSLVSILLLFLRDADVVVVQQTIVSGINIFTRAFEELIV
QCQQNGNVERWLEEVWMWMLKFKDAVFGIALEPGPAGTKLLALKFLETFVLLFTSDISDP
EKSTIEGVKQAVNISWLVGGHPVLDTAVLMLEANRTIGILLNLLQAAGSLPGCLTITVVN
CLAAIARKRPQHFDTILSAFLDFDPSFQIVKGCHVASIQYSFRTAFLGFLRCTYSPILES
RERLIRRLRAMNAGDAADQVIRQVEKMIKNGDRFTRDARVSKDDLPSTQSAVSGELSRKR
LVPPDNEQLANGHVAISKRIRSGPDPYFTLPPQINDSGEGLNSVNRVSPNVPVMVSELTA
VEQMIALIGALLAEGERGAESLEILVSKIHPDLLADIVITNMKHLPKTPPPLAGHGNSPS
TRQVVSQVSQSQFLAASTPTNSVQSFTNTAQAPIPSTTATSSLLSDIPNVSNLPADSKRD
PRRDPRRLDPRRVAVTPGGIAVTSTDDTGATKLEFDDPVSSIKPVSQPVATRDDNTAVDP
TNKIKNDIISVAPPVRSPDWITPKTEAERPGDIPQIADTNTLDPSLSLTNTRFEDLSTVK
VSDDAEKNETDSLSVLEFDQFSLDDQVASMSEDTCLELPSLPLYVELSKEQESKVKNIAH
RQIIESYKHLHGTDCQQFSMSLLARLVAQIDDDNDFLVMLQKHILEDHVRKGHELVMHVL
YHLHSLMTLDSAGCSSSSGVLYENFLLGVAKSLLESFPASDKSFSRLLGEVPLLPESALT
ILNDLCYSDIIDHDGKIIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCAVHSQDEI
RAKAIRLVTNKLFQLSYISEDVEKFATNMLLSAVQHEVSDTGLLQSGRTAQNAEAEVESM
EISGTSKVPESTISENESARVAKSMPQSVPSISFSDAQRLISLFFALCTKKPSLLWIVFN
VYWQAPKTVKQAFHRHIPILVRALGQSHSELLQIISDPPRGSENLLTLVLQILTQETTPS
PDLISTVKHLYETKLRDVTILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALALILQGSA
HTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQS
PLPLLFMRTVIQAIDAFPTMVDFVMEILSKLVTKQVWRMPKLWAGFLKCVYQTQPHSFHV
LLQLPPPQLESALNKHAYLRGPLASYANQPTVKSSLPRSTLAVLGLANETHVQQHLSTSL
HPSDTNSAVRGATLM
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcctacaagagatcaagctctctctctcctcgccgccgccaacaaccacggc
gacgtcaacgtcaaaacctcatctctcaaacaagccaaagacattctcctctccgtcgag
ccttctatcgccgctgaactcttcccttacttgctcgaccttcagtcttctcccgaatgc
ctccttcgcaaattgctcattcaggtgattgaggaaattggttttaaagcagttgagcat
actccttcactggtgtctattctgttgttatttttacgagatgccgatgtagtggttgta
caacaaactattgttagtggcataaatatattcactagagcctttgaggagttgattgtg
cagtgtcaacaaaatggtaatgttgagaggtggctggaagaggtttggatgtggatgctc
aagttcaaggatgctgtttttgggattgccctggagcctggtcctgctggaacgaagctg
cttgcgctgaaattcttggaaacatttgtgttattgtttacatctgacatcagtgatcct
gagaaatcaacaatagaaggagtcaagcaagctgttaatatctcatggttggtgggtggt
caccctgttcttgatacagcagtgctcatgttagaggcaaataggactattggtatttta
ttaaatttactgcaggctgctggcagtctccctggctgcttgactataactgttgtaaat
tgtttagcagccatagcaaggaaaaggccacaacactttgatactattctttctgcattt
cttgattttgacccaagttttcaaatagttaaaggatgtcatgttgccagcatacaatac
tcctttagaactgcttttttggggtttctaaggtgcacttattcaccaatattagagtca
agagaaagattgataaggcgcctgcgagctatgaatgctggggatgctgctgatcaggtc
attcgtcaagttgagaaaatgattaaaaatggtgatcgttttacccgtgatgctcgagtt
agcaaggatgatctgccatcaactcagtcagctgtttctggggaattatctagaaaaaga
ttggttcctcctgataatgagcaattggccaatggtcacgtggccatctctaagcggatt
cgttccggccctgacccttattttactttaccacctcaaataaatgattctggggaaggt
cttaattctgttaatagagtatcacctaatgttcctgtgatggtaagtgaattaactgct
gtggagcaaatgattgctttgattggtgctttgcttgctgaaggggaaagaggtgctgaa
tctcttgaaatccttgtttcaaagattcatcctgatctgttggctgatattgtcataaca
aatatgaaacacttgccaaagacacccccgccactagctgggcatggaaattcgccatca
acacgacaagtagtttcccaagtcagccagtcacagtttctagcagcatctactccgaca
aattctgtccaatccttcactaatactgcccaagcaccaattccttcaactacagccact
agttcattactatctgatatccctaatgtcagtaaccttccagctgattctaaacgtgat
ccacgcagggatccccgtcgcctggatccacggcgtgtagcggtaactcctggaggcata
gctgtaacaagtacagatgataccggggctacaaaattggagtttgatgatcccgtgtct
tcgattaagcctgtttcacagcctgttgcaactcgtgacgataatactgcagtagatccc
acaaacaaaattaaaaatgatataatctctgtagccccccctgttcgatcacctgattgg
ataactcccaaaacagaggcggagaggcctggagatattccccagattgcagatacaaat
actttggatccctcactctctctcactaatacaagatttgaggatctaagtacagtgaaa
gtgtcggatgatgctgaaaaaaatgagacagattcattatctgttttagagtttgatcag
ttttctcttgatgatcaagttgcctctatgtcagaagatacctgtctggaattgccatca
cttccactgtatgttgagctttccaaagagcaggaaagtaaggtgaaaaacatcgctcat
aggcaaataattgagtcatataagcacttgcatgggacagattgtcagcagttttccatg
tcattacttgctcgattagtagctcagattgatgacgataatgactttcttgttatgctg
caaaaacacatactagaagaccacgtgcgaaagggccatgaacttgtaatgcatgttttg
tatcatctgcactccctcatgacattggactcagctggatgctcttcatcttctggtgtt
ttgtatgagaattttctcttgggagtggccaaatctctattggaatcttttccagcttca
gacaagtcttttagtagacttcttggtgaagtcccacttttgccagaatctgccttgacg
attttgaatgatctttgctactctgacattattgatcatgatggaaaaattattcgtgat
attgaacgtgtaactcaaggtcttggtgccatatggagtttaattttaggccgtccacaa
aatcgtcaagcctgcttaggaatagcattgaagtgtgctgtccactcacaggatgagatt
cgtgcaaaagctattcggctggtgacaaacaagctctttcagcttagctacatatcagaa
gatgttgagaaatttgcaacaaatatgcttctttctgctgtacagcatgaggtttctgat
actggtcttttgcaatctgggcgtactgcacaaaatgctgaggcagaggttgaaagtatg
gaaataagtggcacatcaaaagttccagagtccacaatttctgaaaatgagtctgctaga
gttgctaaatcaatgcctcaaagtgttccatctatatcattctctgatgctcaacgcttg
atatctttgttttttgcactatgtacaaagaaacccagtcttctctggattgtattcaat
gtctattggcaagccccaaaaactgtaaagcaggcttttcatcgccacattcctattctt
gttagggcgttagggcaatctcattctgaattgctccaaattatatctgatccaccacga
ggaagtgaaaatcttctgacactggtactgcaaatactaacccaagagacgacaccttcc
cctgatttgatatctactgttaaacatctatatgagacaaaacttagggatgttaccatt
cttgttcccttgctgtcatcactttctaaaaaggaggttttaccaatatttcctcggctt
gtggaccttccactggaaaagtttcaaagagcacttgctctcatactgcagggttcagct
catacaggtccagctttaacacctgtagaggtattggttgctatacatggaattgttcct
gagaaagacggccttgcacttaagaagataactgatgcttgctcggcttgttttgagcaa
cgtacagtgttcacacagcaggttctggcaaaggcattgaaccagatggttgatcaaagt
ccgctgcctctgcttttcatgagaacggttattcaggccattgatgcttttcctacaatg
gttgattttgttatggagatactctcgaaacttgtgactaaacaggtgtggcgtatgcca
aaactatgggcaggtttcttaaaatgtgtatatcagacgcagccacattcttttcatgta
ttgttacagttgccacctccacaactggaaagtgctctcaacaagcatgcttatctcaga
ggtcctcttgcttcttatgccaaccaaccaactgtgaaatcttcactcccgagatcaact
ttagcagttcttggtctagcaaatgaaacccatgtacagcaacacttatcaacttcattg
cacccttctgacacaaattctgcagttcgcggtgcaactctgatgtaa
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integrated database retrieval system
