Lupinus angustifolius (narrow-leaved blue lupine): 109328184
Help
Entry
109328184 CDS
T04664
Name
(RefSeq) THO complex subunit 5B
KO
K13174
THO complex subunit 5
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109328184
09122 Translation
03013 Nucleocytoplasmic transport
109328184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109328184
03041 Spliceosome [BR:
lang03041
]
109328184
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109328184
Spliceosome [BR:
lang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109328184
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Helicase_dom
AOX
Motif
Other DBs
NCBI-GeneID:
109328184
NCBI-ProteinID:
XP_019417057
UniProt:
A0A4P1QWF3
LinkDB
All DBs
Position
LG15:20122134..20124999
Genome browser
AA seq
498 aa
AA seq
DB search
MEGYRLMEESEIDERSIPNADGNEQGFANFDQHREFDESPYEILQNSKVSVENIISEMLS
IKRERKSKSQLPELVTEMFLHFITLRQVNRSILIEEDRVKMETERAKAQVDFTTLQLHNL
MYEKSHYVKAIKACNDFKSKYSDLELVPEDQFFREAPQDTKDSILSNDIAHDFMLKRLTF
ELFERKELCKLHEKLQQKKKILLETIANRKKFLSSLPSHLKSLKKASLPVQNQLGVLHCK
KLKQHHSAELLPPALYVIYSQLLAQKEAFGQPIDLEIIGSLKDAQTFSCIQAHKDTGTPT
NVDSSKLEDDAPDEEEGDQRQRKRPRRVQGQESVDQAGVFQVHPLKITLHVYDDEASNTM
PSKLITLKFEYLVNLNVVCVGTEESNDGSKNDILCNLFPNDTGLELPRQSAKLVVGDAEV
FDSQRTSRPYKWAQHLAGIDFLPEVSPLLLTGRETSDNGEAVRSEDVISGLSLYRQQNRV
QTFLQRIRSRRKAQPALL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatcgattaatggaagaaagtgaaatagacgaacggtcaatccctaacgca
gacggaaacgaacaaggatttgcgaatttcgatcagcaccgagagttcgatgaatcacca
tacgaaattctccaaaatagtaaagtttccgttgagaacataatctctgagatgctctct
attaaaagagagcgtaaatccaaatcacaacttccagaactcgttaccgaaatgttcctc
cacttcatcactctccgccaggtgaataggtctattctgattgaggaggaccgtgtgaaa
atggaaactgagcgagcgaaagcacaagtggattttacgactttgcagcttcataacctt
atgtatgagaaaagtcactacgttaaagctataaaggcttgtaatgatttcaagtccaag
tattctgaccttgaacttgtacctgaggatcaatttttccgtgaggctccccaggatact
aaggattctattttgtccaacgacattgctcatgatttcatgcttaagagactcactttt
gagctattcgagcgcaaagagctgtgcaagcttcatgaaaagttgcaacagaagaagaaa
atccttttggagactattgctaaccgaaagaagttcctgtcaagtctcccttcgcatctt
aagtctctcaagaaagcatccttgccagtacaaaatcaactaggagttctgcattgtaag
aaactaaagcagcatcattcagcagagttgcttccaccagctctttacgtgatttactct
cagttgttggctcaaaaggaggcctttggacaacccattgacctggagatcataggaagc
ctaaaagatgctcaaaccttttcttgtattcaagctcacaaggacactggtactcccact
aacgtggatagttccaaattggaagatgatgctcctgatgaagaggaaggtgatcagaga
cagagaaaaaggccaaggcgggttcaaggacaggagagtgttgatcaagcaggagtattc
caagttcacccacttaaaatcactctccatgtgtatgatgatgaggcttctaataccatg
ccttcaaaactcattactcttaagtttgagtacttggtaaatctgaacgttgtatgtgtt
ggaacagaagaatccaatgatggttccaagaatgatatcttatgcaatttattccccaat
gatacgggactcgagcttcctcgccagtcagccaaactcgttgttggggatgcagaagtg
tttgatagccaaagaacatcacgtccttacaaatgggctcaacacctggcaggaattgat
ttcctgcctgaggtgtctccattgcttcttactggtcgtgaaacttcagacaatggtgaa
gccgtcaggagtgaagatgttatatctggtctttcattatatcgtcagcagaaccgagtc
cagacatttttgcagagaattcgctcaaggagaaaagctcagccggctcttctgtga
DBGET
integrated database retrieval system
