Lupinus angustifolius (narrow-leaved blue lupine): 109329994
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Entry
109329994 CDS
T04664
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109329994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109329994
03009 Ribosome biogenesis [BR:
lang03009
]
109329994
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109329994
Spliceosome [BR:
lang03041
]
Complex A
U2 snRNP components
U2 related factors
109329994
Complex B
109329994
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109329994
Ribosome biogenesis [BR:
lang03009
]
Eukaryotic type
90S particles
Helicases
109329994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
AAA_22
AAA_19
ABC_tran
ResIII
nSTAND3
SRP54
FtsK_SpoIIIE
AAA_7
Flavi_DEAD
AAA_33
AAA_30
T2SSE
NACHT
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
109329994
NCBI-ProteinID:
XP_019419479
UniProt:
A0A4P1QUV8
LinkDB
All DBs
Position
LG16:16444935..16449276
Genome browser
AA seq
721 aa
AA seq
DB search
MGTERKRKVSLFDVVDDGAGKMLKSNGGANNNSLINPWNLRPYSQRYFDILEKRKTLPVW
IQKDEFFKALKENQTLILVGETGSGKTTQIPQFVLDAVELETPDKRRKMMVACTQPRRVA
AMSVSRRVAEEMDVTIGEEVGYSIRFEDVSSAKTVLKYLTDGMLLREAMADPLLERYKVV
ILDEAHERTLATDVLFGLLKEVLKNRPDMKLVVMSATLEAEKFQGYFYGAPLMKVPGRLH
PVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACRKINKEVGNLGD
QVGPVKAVPLYSTLPPAMQQKIFEPAPPPLKEGGIPGRKIVVSTNIAETSLTIDGIVYVI
DPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQ
TYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTK
LGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCFVRPREAQKAADEAKARF
GHIDGDHLTLLNVYHAYKQNNEDPSWCYENFINQRGLKSADNVRQQLVRIMGRFNLKLCS
TDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQTVHLHPSNCLDHKPEWVIYN
EFVLTSRNFIRTVTDIKGEWLVDIASHYYDLQNFPNCEAKRVLDKLYKKRERVKDEGKSR
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgagaggaagagaaaagtgagcttgttcgatgtggtagacgacggtgccggt
aagatgttgaaatcaaatggtggcgcaaataacaatagtctcataaatccatggaattta
aggccttactctcaaagatactttgacattttggagaagagaaaaactctccctgtttgg
atccagaaagatgagttttttaaggctttgaaggagaatcagactttgattttggttggt
gaaactggtagtggtaaaaccacacagatccctcagtttgttttggatgccgttgagtta
gaaactcctgataaacgcagaaagatgatggttgcatgcactcagccccggagagtggct
gcaatgtctgtttcccggcgtgtggctgaagagatggatgtaactattggggaagaggtt
ggttacagcatcagatttgaagacgtcagtagtgcaaagacagttttgaagtatctcaca
gatggtatgctcttaagagaagcaatggcagatccacttttggaacgttacaaagtagtt
attctcgatgaggcacatgaaaggacattggctacagatgtgctatttggtcttctgaag
gaagttcttaaaaatagacctgacatgaagttggttgttatgagtgcaactcttgaggct
gaaaagtttcagggctatttttatggtgcccctcttatgaaagttcctgggaggctccat
ccagtggagattttctatactcaggaacctgagagagattacttggaggctgctattagg
acagtggtgcaaatacacttgtgtgagcctcctggcgatatacttgtttttttgactgga
gaagaagagatagaagatgcatgccgcaaaataaataaagaggttggaaatcttggtgac
caggtgggccctgtgaaggcggtacccctatattccactcttcctccggctatgcagcag
aagatttttgaacctgctccacctccgctcaaggaaggagggattcctggaaggaagatt
gtggtatcaacaaacattgcagaaacttctttaacaattgatggtattgtctatgttatt
gaccctgggtttgctaagcagaaggtttataacccaagaatccgtgttgagtctctgtta
gtttctccaatatcaaaagccagtgcacatcagaggtcagggcgtgcaggtagaactcaa
ccagggaaatgttttagactttatactgagagaagtttcaataacgatcttcagccacag
acttatcctgaaattttgagatcaaatctggccaacacagttcttaccctgaagaagctc
ggtatagatgatttagtgcattttgatttcatggatcctcctgctcctgagaccttaatg
cgtgcgttggaagtgttgaattacttgggcgcactggatgatgagggtaacttaacaaag
ctcggtgagataatgagtgagtttcccttagacccgcagatgtcgaaaatgctcgttgtc
agccccgaattcaactgttcaaatgagattctgtcaatttctgccatgctctcagtaccc
aattgctttgtccggcctagggaggcacaaaaagctgcggacgaagcgaaagctaggttt
ggacacatcgatggagatcatcttacactcttgaacgtctaccatgcatacaagcaaaac
aatgaagatccctcttggtgctatgaaaacttcattaatcaaaggggactgaaatcagct
gataatgttagacaacaactagtgcgtatcatgggccggtttaacctgaagttatgcagc
actgacttcaatagtcgtgactactatatcaacataaggaaggctatgcttgctggatat
tttatgcaggttgctcatctggagcgtacaggacactacttgactgtgaaagataaccag
acggtgcatttgcatccatcaaattgcttggatcacaagcctgaatgggtaatctacaat
gaatttgttctcaccagtcgaaattttatccgtactgtgacagacataaaaggggaatgg
ttggttgatatagcatcacattactatgatctgcaaaattttccaaattgcgaggccaag
cgtgttctcgacaaactatacaagaagcgagagagggtaaaggatgaaggaaagagtcgc
aaatga
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integrated database retrieval system
