Lupinus angustifolius (narrow-leaved blue lupine): 109330787
Help
Entry
109330787 CDS
T04664
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109330787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lang03400
]
109330787
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109330787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DUF2799
Helicase_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
109330787
NCBI-ProteinID:
XP_019420610
LinkDB
All DBs
Position
LG17:2922358..2926405
Genome browser
AA seq
1151 aa
AA seq
DB search
MHCVSARTRSKRSLLHNLKQSTTTNNNHVSVSEVVGLSSDNDEEEYETVIDYGEEEEEAT
EFSAIENDDDGEVVSDYKEEDNEVHIVKGVKNEVKCGNVEKKEGKRGRGRPKRKEGEGEV
GGLRKRRMLGLDILIDENNSQENKCAAKRTRSHFLSKNKLKFGTIAKPICIDDNDEENEE
EKESDFVHHTHEEEASDSKSKEEKASGSESDEQYSRGFKRKGHACVHNKGKRHKRQGFDV
VKILKDSIYGKGEMVLKARDKEQNPCTDLPIKFSFLHKGPKEAEKSEEALEPTWAKIESG
LDGTPDSYEEEYESSALPKKKHTSSKFSFSHKDSKATQISEEENGLEPIWDEMEHGLNDT
PNSWVSCHKREASTCCRKKRHVHSDPNNIGVLNNVLQDYIYAEGEVPMEEPINNELNPNK
ELLPTFPFMYVKPKSPEKSDEEKELDALWAQMDLALYATQEKISSPASQVQNDFDSDNDQ
CPKDEVSIATTCRQGKHHLILNDEIGLVCAYCLHVGLDIKDYLPPFSENPFGKSNRRESY
IKDHAHHSVFNDFQDRVTGYDDGDDNLCDYTETVWAIMPGLKKNLYPHQCEAFEFLWKNL
AGGIFLDQLKKQEDFDGGGCIISHAPGTGKTRLTITFLQAYMKLYPKCRSMIIAPKGMLL
TWEEEFRKWNVDIPFHNLNNLDYSGKESEVAMNLVTGSGCNISSRLLKLYSWKCNKSILG
ISYKLFEQLTRQDCSDKELRKFLLEHAGLLVLDEGHTPRNSRSLIWKAVSQLRTKKRIIL
SGTPFQNNFDELYNTLCLARPKFSDWNPSRGKEVFKDKPGRPRKEYVGKWRHLTKSFDKV
TDYSRKFKIAKEVRNMIHSFVHVHKGTILQESLPGMKEFVVILKPTRLQKELLEEIQRKR
KRLSHGNQAPLNVMKIEYEESVTAVHPALFDLSEGKGKFERLRLNPVESSKTIFLMELIR
LSELVNEKVLVFCQYIDPLKLMASQLKHHFSWTEGREVLHMHGQVEAKLRQASINSFNNP
NSKVRVMLASTKACYEGISLVGASRVVLLDVVWNPSVERQAISRAYRLGQKKYVYTYHLI
TAGTREEEKICRQAEKDQLSELMFFNSDGDQQHHEKESSAELEDQILEEMVQQQKFKHVF
EKVAIKKHTLL
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgtttctgctagaactcgttctaaacgatcactactccacaatctgaaacag
agcaccaccaccaacaacaaccatgtttctgtttccgaggttgttggcctcagttccgac
aatgatgaagaggaatatgaaaccgttattgactatggagaagaagaagaagaagccact
gaatttagtgcaattgagaatgatgatgatggtgaagttgtctcagattataaggaagaa
gataatgaggtgcacattgtgaagggagtgaagaatgaagtaaaatgcggtaatgtagaa
aagaaggagggtaaaagaggaagagggagaccaaaaagaaaggagggtgaaggtgaggtt
ggaggattaaggaagaggagaatgttggggcttgatattttgattgatgagaataatagt
caagagaataagtgtgctgcaaaaagaactcgttcacattttcttagtaagaacaagttg
aagtttgggactattgctaaaccaatatgcattgatgataatgatgaagagaatgaggaa
gaaaaggaaagtgattttgttcatcacactcacgaggaggaagcaagtgattcaaaatct
aaggaagaaaaagcaagtgggtctgaatctgatgaacaatactctaggggtttcaagaga
aaaggccatgcatgtgtgcacaataaagggaaaaggcacaaaaggcaaggttttgatgtg
gttaagattctcaaggattctatatatggtaaaggggagatggttttgaaggcaagagac
aaggaacaaaatccttgtactgatttgccaatcaagttttcatttttacataagggtcca
aaagaagcagagaagtcagaagaagcattagaaccaacttgggccaaaatagagagtggt
cttgatggtactcctgattcgtatgaagaggaatatgaatcctctgcactcccaaagaag
aaacacacctcatccaaattttctttttcacataaggattcaaaagcaacacagatatca
gaagaagaaaatggactagaacctatttgggatgagatggagcacggtcttaatgatact
cctaattcttgggttagttgtcacaagagagaagcctccacatgctgcagaaagaagaga
catgttcacagtgatccaaataacattggtgtgcttaataatgttctccaggattatatc
tatgctgagggagaggtacctatggaagagccaatcaacaatgaactaaacccaaacaag
gagttgctgccaacgtttccttttatgtatgtgaagccaaaatcaccagagaaatcagat
gaagagaaagaattagatgcactgtgggctcaaatggatcttgctctttatgctacacag
gaaaaaatctctagtcctgcttctcaggtccaaaatgattttgattctgataatgatcaa
tgtccaaaggatgaagttagcatagctacaacttgtcgtcaagggaagcatcatctcatt
cttaatgatgaaataggacttgtatgtgcatactgcttacatgttggattggatataaag
gattatctacctccctttagtgaaaatccatttggaaagtcaaacaggagagaatcttac
attaaggaccatgcacaccactctgtctttaatgattttcaggatcgagttacaggatat
gatgatggtgatgataacctctgtgattataccgaaacagtgtgggcgataatgccaggt
ctgaaaaagaatttgtatcctcatcagtgtgaagcttttgaatttctttggaagaattta
gctggagggatttttcttgatcagttgaaaaaacaagaagattttgatggaggtgggtgc
attatatctcatgctcctggcactgggaaaacccgtctcactattacatttctccaggca
tacatgaagttatatccaaaatgcagatcaatgattattgctcctaaaggcatgcttctt
acatgggaagaggagtttagaaaatggaatgttgacattccatttcacaatttgaacaat
cttgactactctggcaaggagagtgaggtagctatgaatcttgtgaccggttctggttgt
aacatttcaagccgattattgaagttatattcctggaagtgtaataaaagcatcttggga
attagttacaaattgtttgagcaacttactaggcaggactgcagtgataaggagttaagg
aaattccttcttgaacatgctggtttattagttcttgatgagggacacactcctcgcaat
tcccgaagtcttatatggaaagctgtctcacaattgcggacgaaaaagcggataatcctc
tctggaactccatttcagaataattttgatgagctttacaacacactctgcttggctagg
cccaagttttctgattggaatccatctagagggaaggaggtattcaaggataagccaggg
cgcccaagaaaggaatatgttgggaaatggaggcatctgacgaaatctttcgacaaagtt
actgattatagtagaaaattcaagatagcgaaagaggtcagaaacatgatacattctttt
gttcatgtacacaagggaacaatactgcaagaaagtcttcctggaatgaaggagttcgta
gttatattaaagccaacccggttgcagaaagaacttcttgaggagattcagagaaaaagg
aaaagactttctcatggaaaccaggcacccttgaatgtgatgaaaatagaatatgaggaa
tctgtaactgctgttcatcctgcattgtttgatctatctgaaggcaaggggaagtttgaa
aggcttagattgaacccggtggaaagttcgaaaacaatttttttaatggaactcatcaga
cttagtgagcttgtgaatgaaaaggtcttagttttctgtcaatatattgatcccttgaag
cttatggcaagccagcttaaacatcattttagttggacagaaggaagagaggtcttacat
atgcatggacaagtcgaagcgaagttgcgtcaagcttcaataaattcttttaacaatccc
aatagcaaagtaagggtaatgctagcatcaaccaaggcttgttatgaaggtatcagttta
gttggtgcatcaagggttgttttgctggatgttgtatggaatccctcagtggagaggcaa
gcaattagccgcgcttatcgactcgggcagaagaaatatgtgtacacttaccatctgatc
acagcaggaacaagagaagaagaaaaaatctgtcgtcaagctgagaaagatcagctatca
gagttgatgttctttaattctgatggggatcagcagcatcatgaaaaagaatcatctgca
gaattggaagatcaaattttggaagagatggttcaacaacaaaagtttaaacatgtgttt
gaaaaagtagccattaagaaacacactcttctttga
DBGET
integrated database retrieval system
