Lupinus angustifolius (narrow-leaved blue lupine): 109331177
Help
Entry
109331177 CDS
T04664
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang04142
Lysosome biogenesis
lang04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
109331177
04148 Efferocytosis
109331177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lang04131
]
109331177
Membrane trafficking [BR:
lang04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
109331177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
109331177
NCBI-ProteinID:
XP_019421069
LinkDB
All DBs
Position
LG17:complement(1668769..1675934)
Genome browser
AA seq
988 aa
AA seq
DB search
MVHSAYDRVEVVSDSPSKIEAIESYGSKLLLACTDGSLRIYAPESSNSSSPYLLEKNIVG
FTKKPLISMEVLESRELLLSLSESIAFHRLPTFETIAVITKAKGANVFSWDHRRGFLCFA
RQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMCWCGENICLGIRREYVILNSSNGTLSEVF
TSGRLAPPLVIPLPSGELLLGKENIGVFVDQNGKLLTEGRICWSEPPLEVVIQKPYAIAL
LPRFVEIRSLRDPYPLIQTIVLRNVHHLCESNNSVILALDNSVHALIPVSLGAQIVQLTA
SGNFEEALSLCKLLPPEDSSLRVAKEESIHIRYAHYLFENGSYEDAMEHFLDSQVDITYV
LSLYPSIILPKTTVVHESEKLDIYGDASNHSRGSLGMSDDMEPLSTSHTSEPDENASLIS
KKVSHNMLMALIKYLHKRRYSFIEKATAEGTEEVVLDAVGDNFTSYNRFKKTNKGRGPVS
SGAREMASILDTALLQALLFTGQSSLVLELLRGLNYCDLKICEEILRKGNHYVVLLELFK
YNSLHREALELLHKLVEESKSKQSEITHRFKPEDIVEYLKPLCGTDPILVLEFSMLVLES
CPSQTIDLFLSGNIPADMVNSYLKQHSPNMQAKYLELMLAMNENAISGNLQNEMVNIYLS
EVLDWYADLSAQQKWDEKAYSQTRKKLLSALESISGYNPEALLKRLPSDALYEERAILLG
KMNQHELALSLYVHKLHVPELALSYCDRVYESMHQPSGKYGSNIYLTLMQIYLNPMKTTA
SFEKRITNLLSLQNTTTPKVGSLTSVKTKAVRGTKKIAAIEGAEETKISLSSTDSSRSDG
DGDGDADEFSEGGSTIMLDEVLDLLSCRWDRINGAQALKLLPRETKLQDLHSFLGPLLRK
SSEMYRNCSVVKSLRQSENLQVRDELYSQRKAVVKITGDSMCSLCRKKIGTSVFAVYPNG
ATLVHFVCFRDSQNMKAVAKGSQLRKRL
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggtacacagcgcctacgatcgcgtggaagtagtctccgattccccttccaaaatcgaa
gccatcgaatcctacggttccaaacttctcctcgcttgcaccgatggatcccttcgtatc
tacgctccagaatcttccaattcctcttccccttaccttctcgaaaagaatattgttggt
ttcacaaagaagcctcttatttccatggaagttcttgaatcccgagaactcctcttatct
ctctctgaatccatcgctttccataggctccctacttttgaaaccattgcggttattacc
aaagctaagggcgctaatgtcttttcctgggaccaccgcagaggcttcttatgcttcgca
aggcaaaaacgtgtctgcatattcagacacgacggtggtagaggatttgtggaagtgaaa
gagtttggtgttccagatgtggtgaaatccatgtgctggtgcggtgagaatatatgttta
gggattagacgagagtatgtgattttgaattcttcaaatggaacattgtctgaggtgttt
acctctgggagactagcgccacctttggtcatacctcttccttctggagagcttcttctt
ggaaaggagaacattggggtctttgtggaccaaaatgggaagcttcttacagaaggtagg
atttgttggtctgagccccccctagaagttgtaattcagaagccatatgctatagcttta
cttcccagatttgtggagattcggtctctccgagatccatatcctctgatacaaaccatt
gttcttcgaaacgttcatcatctttgcgaaagcaataattctgtgatacttgctttggat
aattctgttcatgccctcatccctgtttctcttggagcccagattgtccaattaacagca
tctggcaactttgaagaggccttgtcattgtgcaagctccttccacctgaagattcaagt
ctgcgtgttgcaaaggaggagtcaattcatataagatatgcccactatctttttgagaat
gggagctatgaggatgcaatggaacattttctagattctcaagttgatataacctatgta
ctttctctgtatccgtccattatccttccaaaaacaactgttgttcatgaatcagagaag
ttagacatttatggggatgcttcgaatcactccagaggttctttgggtatgtcagatgat
atggaacccttatcaacatctcatacttcagaacctgatgagaatgcatcacttatatca
aaaaaagtgagccataatatgcttatggctctcataaaatatttacacaagaggagatat
agttttattgagaaggccactgccgaaggaactgaagaagttgttttagatgcagttggg
gataactttacatcttataataggttcaagaaaacaaacaagggtcgtggtcctgttagt
tcaggagctcgggagatggcttcaattttggatactgctctacttcaagcattgcttttt
actggacaatcttcattggttttagaattactgagaggtcttaactactgtgatttgaaa
atatgtgaagagatacttcgaaaaggcaaccattatgttgttttactagaactcttcaag
tacaactcgttgcaccgggaagcacttgaactgcttcataaattggtggaagagtcaaag
tctaagcagtctgaaattacccataggttcaagccagaggacattgttgagtatctcaag
ccgctgtgtgggacagaccccatacttgttctagagttctcgatgcttgttcttgaaagc
tgtccatcccaaactattgatctctttctgtccggaaatattccagcagatatggtgaac
tcatatttgaagcagcactctcctaacatgcaagctaaatatttagagctcatgcttgca
atgaatgagaatgccatatctggcaatttgcaaaatgaaatggtaaacatatatctttct
gaagtacttgattggtacgctgatttaagtgctcaacagaaatgggatgagaaagcttat
tcccaaacaaggaaaaaattattgtctgccttagagagtatatcaggatacaatccagag
gctctgctgaaacgtcttccatcagatgctttatatgaagaacgtgcaattcttttgggg
aaaatgaaccaacatgaacttgcattatctttgtatgttcataagcttcacgttccagaa
ctggcattgtcttattgtgatcgagtatacgagtctatgcatcagccatctggaaaatat
ggcagcaacatatatcttacacttatgcaaatctacttgaatcctatgaagacaaccgca
agctttgaaaagagaattacaaacctattatccctacagaatacaaccactccaaaagtt
ggctcattgacatcagtaaaaactaaagctgtccgaggaacaaagaaaattgctgcaata
gagggtgctgaggaaacaaaaattagtttgagcagcacagacagcagcaggagtgatggt
gatggtgatggtgatgcagatgaatttagtgagggtggttctactatcatgcttgatgag
gtccttgatttgttgagttgccggtgggatagaataaatggagctcaggcccttaaactt
ctaccaagagagaccaaattacaggacctacattcatttctcggaccccttctgagaaaa
tctagtgaaatgtaccgtaattgctcagtggtcaagagcttgagacagagtgagaacctt
caggtgagagatgaactgtatagccagaggaaagcagttgtgaagataaccggtgatagc
atgtgttctttgtgcaggaagaaaatagggactagtgtttttgcagtttaccccaatggg
gccactctggtgcactttgtttgtttcagagattctcaaaacatgaaagctgtagccaag
ggatctcaattgaggaagcgattatga
DBGET
integrated database retrieval system
