Lupinus angustifolius (narrow-leaved blue lupine): 109331421
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Entry
109331421 CDS
T04664
Name
(RefSeq) polyadenylate-binding protein 8-like
KO
K13126
polyadenylate-binding protein
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03015
mRNA surveillance pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109331421
09123 Folding, sorting and degradation
03018 RNA degradation
109331421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109331421
03041 Spliceosome [BR:
lang03041
]
109331421
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109331421
mRNA cycle factors
Stress granule specific factors
109331421
Spliceosome [BR:
lang03041
]
Complex C
Other components
Complex C specific factors
109331421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_7
RRM_3
RRM_RdRP1_2
RRM_MARF1
PABC_AtC3H46
DUF5062
Chromo_MORC2_6th
GH97_C
Motif
Other DBs
NCBI-GeneID:
109331421
NCBI-ProteinID:
XP_019421446
UniProt:
A0A1J7G1I8
LinkDB
All DBs
Position
LG17:complement(6876405..6881553)
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AA seq
648 aa
AA seq
DB search
MAQVQPQNAIQGGPNGAGGAGNHFVTTSLYVGDLDPSVTDSQLYDLFNQLGQVVSVRVCR
DLTTGRSLGYGYVNYSNPQDAARSLDVLNFTPLNNKPIRIMYSHRDPSIRKSGAGNIFIK
NLDRTIDHKALHDTFSSFGSILSCKVATDSSGNSKGYGFVQFDNEESAQKAIEKLNGMLL
NDKQVYVGPFLRKQEREGSADKAKFNNVFVKNLSESTTEDELEKVFGEFGPITSAVVMRD
GDGKSRCFGFVNFENTDDAAQSVEALNGKKFDDKEWYVGKAQKKSEREHELKIKFEQSMK
EAADKYQGANLYIKNLDDSIGDEKLKELFSSFGTITSCKVMRDPNGISRGSGFVAFSTPE
EASRALLDMNGKIVVSKPLYVTLAQRKEDRRARLQAQFSQMRPVTVAPSVAPRVPMYPPG
GPGIGQQIFYGQGPPAMIPSQPGFGYQQQLVPGMRPGGAPMPNFFMPMVQQGQQGQRPGG
RRAGGVQQSQQPVPLMPQQMLPRGRVYRYPPPGRGIPEVPIPGVAGGMFSVPYDVGGIPI
HDAGLSQQVPIGALASALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTE
VLHLLESPEALKAKVAEAMDVLRNVAQQQAGGAADQLSSLSLNDNLVS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttcaacctcagaatgcgattcagggtggtcctaacggtgctggtggtgct
ggtaaccatttcgtgacgacgtcgctttacgtcggagatcttgacccaagcgtaaccgat
tcgcagctctatgacctgttcaaccagttaggtcaggtcgtgtctgttagggtttgcagg
gacttaaccactggaagatcacttggttatggttatgtcaattacagcaatccccaagat
gctgccagatcattggatgttctgaacttcactcctctcaataacaagcccatacgtatc
atgtattctcaccgtgatcccagtatccgtaaaagtggagcaggaaatattttcattaag
aatttggacaggacgattgaccacaaggcattacatgatacattttcttcatttgggagc
atcctttcttgcaaggtggctacagattcttctggtaactcgaaaggctatgggtttgta
caatttgataatgaagaatctgctcaaaaagccattgagaagttgaatggtatgctgttg
aatgataagcaagtttacgtgggacccttccttcgcaagcaagagagagaaggttcagct
gacaaggcaaaattcaacaatgtttttgtaaagaatctgtctgaatcaaccactgaagat
gaactggagaaggtttttggtgagtttggaccaattaccagtgctgtagtgatgagggat
ggagatgggaaatcaaggtgctttggatttgtaaacttcgagaatacggatgatgctgct
cagtctgttgaggctcttaatggcaagaagtttgatgacaaagagtggtacgttggcaaa
gctcaaaagaaatctgaaagggagcatgaattgaaaattaaatttgagcagagcatgaag
gaagccgctgataaatatcaaggggcaaacttgtatatcaaaaatttagatgatagcatt
ggtgatgaaaaacttaaggagctgttctcgtctttcggtaccattacctcttgcaaggtt
atgagagaccccaatggcataagtcgaggatcaggatttgttgcattctcaacccctgag
gaggcatctagagctctcttggatatgaatggaaaaattgtggtaagcaaacctctatat
gtgactctggcccaaaggaaagaggatagaagagctagactgcaggctcaattttcccaa
atgcgccctgttacagtggcaccctctgttgctcctcgtgtgccaatgtacccacctggt
ggtccaggtattggtcaacaaatattttatggtcaagggcctcctgctatgattccttcc
cagcctggatttgggtatcaacagcaacttgtgcctggtatgaggcctggtggggctccc
atgccaaatttctttatgccaatggttcagcagggacaacaggggcagcgtcctggtgga
agacgtgcaggaggagttcagcagtcccagcagcctgttcctcttatgccacagcagatg
cttcctcgaggacgtgtgtatcgttatcctcctcctggtaggggtattcctgaagttccc
atccccggggttgctggaggcatgttttctgttccatatgatgtgggtgggataccaatt
catgatgcaggactctcccagcaagttcctattggagctttggcttctgctctggcaaat
gcttcccctgagcagcagaggacgatgctgggtgagaatctttatcctctcgtggaacag
ttagagcctgataatgctgccaaggtcactggcatgcttttggagatggaccagactgaa
gtgctgcacttgctcgagtcacctgaagccctgaaagcgaaggtggctgaggcgatggat
gtcctgaggaatgttgcacagcagcaggctggtggtgcagccgatcagctgtcttcatta
tcactcaatgacaaccttgtttcttga
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