Lupinus angustifolius (narrow-leaved blue lupine): 109331845
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Entry
109331845 CDS
T04664
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lang03009
]
109331845
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109331845
Ribosome biogenesis [BR:
lang03009
]
Eukaryotic type
Pre-60S particles
Helicases
109331845
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
109331845
NCBI-ProteinID:
XP_019422147
UniProt:
A0A1J7G2J0
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All DBs
Position
LG17:2638271..2645873
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AA seq
581 aa
AA seq
DB search
MAETNENVSKETVKEYEFEESEDQSFEDLGLDARLVRALLKKGIDKSTPIQRVAIPLILE
GKDVVARAKTGSGKTFAYLLPLLQKLFTNNTDRKKLAPNAFILVPTRELCQQVYNEVSSI
LELCRVQLKVVQLNSNMLHSDLRAALTGPPDVLISTPTCVQKCLSSGVLQGASINSSLET
LVLDEADLLLSYGYENDIKAFTPHIPRSCQCLLMSATSSADVDKLKKLILHNPFILTLPE
VGNHKDDIIPKNVEQFWIPCAERDKLLYILSVLKLELVQKKVLIFTNTIDTSFRLKLFLE
KFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIAADISQSKEKDEATKENNGGSRKSRK
YAKHKLDSEFGVVRGIDFKNVYTVVNFEMPQSVAGYVHRIGRTGRAYNSGASISLVSPDE
MDTLEEIRSFVGDDENNGSNTIAEFPLLTKNLVESLRYRAEDVAKSVTKLAVRESRAQDL
RNEILNSEKLKAHFESKPRELDLLKHDKLLSKNAPPTHLRGVPDYLLDKTTKEAKQMVKL
ARDAMGNNNHRHRGPKRKTRKEGDPLKAISSSVSKRTRKGV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacaaacgaaaacgtttccaaagaaaccgtaaaggaatacgaatttgaagag
tcggaggaccaaagtttcgaagaccttggactagatgctcgtcttgttcgtgcccttctt
aagaaaggaatcgataaatccactccgattcagcgcgtcgcaattccactcatattggaa
ggtaaagatgtggtcgctcgagctaaaacgggttctggaaagacctttgcttatcttctt
ccgttgcttcagaaattgtttactaataatactgacaggaagaagctagcacccaatgct
tttattcttgtccctactcgcgaattgtgtcaacaggtatacaatgaggtctcatcaatc
cttgagttgtgcagagttcaattgaaagttgtgcaattgaatagcaatatgttgcattct
gacttgcgggcagcactcactggaccaccggatgttttgatctccacacctacttgtgta
caaaagtgcttgtctagtggagtacttcaaggggcatccattaatagttcacttgaaact
ctagtcctcgatgaggccgatcttctattatcatatggatatgagaatgatataaaagct
tttacaccccatattcccagaagttgtcagtgtcttcttatgtcagcaacatcaagtgct
gatgttgataaactgaagaagctgattctacacaaccccttcattttgactttgcctgaa
gtgggaaaccataaggatgacatcatccctaaaaatgttgagcagttctggatcccatgt
gctgagcgtgataagttgctttacatcctttctgtcttgaaactggagttggtccaaaag
aaagttttgatattcactaataccatagacacgagtttcagattgaaactgtttctggaa
aagtttgggatcaagtctgctgttttgaatgctgagttgccgcagaattctcgtctccat
attcttgaggaattcaatgctggcctattcgattatctaattgcagctgatattagccag
tcaaaggagaaggatgaagcaactaaggaaaataatggtggatcaaggaagtctagaaaa
tatgctaagcacaaattagattctgaatttggagtagtaagaggaattgactttaaaaat
gtatacacggtggtaaactttgaaatgcctcaaagtgttgcaggatatgtacatcgaatt
ggacgtacaggaagagcatacaattctggtgcttcaatctctctggtttctccagatgag
atggatactttagaagaaataagatcttttgttggggatgatgagaacaacggctcaaac
accattgctgagtttcccctgctcaccaagaatctggttgaatccttacggtatagggct
gaggatgtggcaaagagcgtaaccaaacttgctgtccgagaatcacgagcccaggatttg
aggaatgaaattttgaactctgaaaagttgaaggctcattttgaatctaaaccaagggaa
ctagatctattgaagcatgacaagcttttgagcaagaatgcccctcctacgcacctacgt
ggtgttcctgactacctattagataaaacaacaaaagaggcaaagcaaatggttaagctt
gcaagggatgcaatgggaaataataatcatcgccaccggggacccaagagaaaaactaga
aaagaaggcgaccctttgaaggccatctcttcctcggtatcaaaaagaacgcgcaaaggt
gtgtga
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