Lupinus angustifolius (narrow-leaved blue lupine): 109332831
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Entry
109332831 CDS
T04664
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109332831
03036 Chromosome and associated proteins [BR:
lang03036
]
109332831
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
109332831
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109332831
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
109332831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_16
AAA_22
DEAD
Helicase_RecD
MOV-10_Ig-like
PhoH
SLFN-g3_helicase
AAA
ATPase_2
Mov-10_helical
AroM
Motif
Other DBs
NCBI-GeneID:
109332831
NCBI-ProteinID:
XP_019423448
LinkDB
All DBs
Position
LG18:complement(16415307..16420741)
Genome browser
AA seq
965 aa
AA seq
DB search
MQKPSLFNTAFCTTRFDLKLGSSIQLFPMSTVGDWSDEERSVIGGKAEIGFLDFEEEKSV
YSYADNEEEPIIISAPFALVDGKPQSVFVGHTAVDIITIKNTTCEPVTLWSVHIFASNPA
DSFTLSLMEPPSANSNSEVCALQSFLESFTLEDRMLQPGQTLKVWLSCKTKDMGMYSSVL
NFDLGDKVIERVAFLLVEDKISKSLTAKRPYSKGRRKDKFVVENVVPGFRPLGKANRKYI
NRLPKYQIPRDVRDLLESKQIPQVVEEGLRKGRYAVYFKTLVIMEEIQLEEDMRTYDMDS
VTMRKKSNQFLSMEVPGLAERRPSLVHGDYIFAKIASGHDNNNKSYQGFIHRVEADEIFL
KFDPEFHLLHRDGNLYNVHFTYNRINMRRLYQAVEAAESLGSEFLFPSASSKRRCIKTND
LVPISGSLNEEQECSIKMILGSKGAPPYLIHGPPGTGKTRTIVEAVLQLYKHHRNARVLI
CAPSNSAADYILERLLAQQAVEFRENEIFRLNASTRPYEDLKPELIRFCFFDDLIFKCPP
FNALMHYKIVISTYMSASLLYAEDVARGHFSHVFLDEAGQASEPETMIPISHLCRRETVV
VLAGDPMQLGPVVFSKNAEQFGLGKSYMERLFECDLYDSGDANYVTTLLRNYRCHPEILY
LPSKLFYNGELIACRDQTTFTVSEDLIPNKEFPILFFGIQGCDEREGNNPSWFNRVEASK
VVEVVKRLIAGGNIRDEDIGIITPYRQQVLKIKQTLENLDMPDIKVGSVEQFQGQEKEVI
IVSTVRSTIKHNDFDRVHCLGFLSNHRRFNVAITRAISMLIIIGNPHIICKDDRWSQMLW
HCVENSSYQGCTLPERLETCDNSNKGKNALPSGNVEWGQDNALPSENVGWGQDDNVEWGK
DNALPSENVGRGQDDNVEWGQDNALPSENVGWGQDDNVEWGQDSSQFEIPKPVTDEAEWS
DGWKN
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaccctcacttttcaatactgcattttgcactaccagatttgatttgaaactt
ggaagcagtatacaattgtttccaatgagtaccgttggagattggtcagatgaggagcgc
tctgtcattggagggaaagcagaaatcggatttttagattttgaggaagagaaatctgtt
tatagttatgctgataatgaagaagaaccaatcattatatctgcaccatttgcacttgtc
gacgggaaaccccaatcagtatttgttggacatactgctgtggatataataaccattaag
aatactacttgtgaacctgtgaccctatggagtgttcacatatttgcctcaaatccggca
gactctttcactctttctctgatggaacctccatcagcaaattcaaattcagaagtatgt
gcacttcagagctttttagaatcattcactttggaggacaggatgcttcagcctggtcag
accttaaaagtatggttgtcttgcaaaacaaaagatatgggcatgtactcttcagttctg
aattttgatcttggagataaagttatagaaagggtggctttcctcttagttgaagacaaa
atatccaagtctttgactgctaagagaccttattcaaaaggaaggagaaaagacaaattt
gttgtagaaaatgttgttccaggctttcgtcctctagggaaggcaaatcggaaatacata
aataggcttccaaaatatcaaattccgagggatgtcagagacttgcttgagagcaagcag
atccctcaagttgttgaagaaggtcttagaaaaggccgttatgctgtgtatttcaagaca
ttagtgataatggaagaaatacaattggaggaagacatgaggacttatgacatggattct
gtaacaatgaggaagaaatcaaatcaattcttgtccatggaggttcctgggcttgctgag
agacgaccatcactggttcatggggattatatcttcgccaagatagcatcgggacatgat
aacaacaacaaatcctatcagggatttatccaccgcgtcgaagctgatgagatctttttg
aagtttgatcccgaatttcaccttctccacagagatggaaatctatataatgttcatttc
acatataataggatcaatatgagaaggttatatcaagcggttgaagcggcagaaagcttg
ggatccgagtttctctttccatctgcttcatctaaaaggaggtgcatcaaaaccaatgat
ttggttcccatatctggttctttaaatgaggagcaggagtgttcaatcaagatgattctt
ggtagcaaaggtgcaccaccatatctaattcatggccctccaggtacgggcaagacaagg
acaatagtagaagcagtcctccagctctacaagcatcataggaatgcacgtgttcttatc
tgcgcaccttcgaatagtgcagcagactacatactggagcgactccttgctcaacaggct
gttgaatttcgagaaaatgaaatattcaggctcaatgcatctaccaggccatatgaggat
ctcaaacctgagctgatccgcttctgcttctttgatgatttgatatttaagtgcccccca
ttcaatgcccttatgcattacaagattgtaatatccacatatatgagtgcctctcttctg
tatgccgaagatgttgcccggggtcacttttctcacgttttcttggatgaggctggccaa
gcttcagaaccggaaaccatgatacctatatcccatctctgcagaagggagactgttgtt
gttctagctggagacccgatgcagttgggtccagtagtattttccaaaaatgcagaacag
tttggattggggaaatcatacatggaacggttgtttgaatgcgatttgtatgacagcgga
gatgcaaattatgtaactacattgcttagaaactatcgatgtcacccagagattttatat
ctcccttcaaagctgttctataatggagaactgattgcatgtagagatcaaacaactttc
acagtgagtgaagacctcattcctaataaggaattccctattcttttttttggcatccaa
ggatgcgatgaaagagaagggaataacccatcatggttcaaccgagtcgaagcaagtaag
gttgtcgaagtagtgaagaggctgatagctggtgggaatataagggatgaagacattggc
attataacaccatacaggcagcaagtgctcaaaattaaacagacacttgaaaatctagat
atgcctgatatcaaagttggtagtgttgagcaatttcaaggtcaagagaaggaggttatt
atcgtatcaactgttcggtcaaccatcaaacacaatgactttgacagagtccactgtctt
ggctttttgagcaatcatagaaggtttaatgtggctataacccgtgcgatctcaatgctc
attataattgggaatcctcatattatctgcaaggatgatcgttggagccaaatgttgtgg
cattgcgtggaaaattcatcttatcagggttgtactcttccagaaaggctggagacttgt
gataacagtaacaaaggaaagaatgcattaccctctggaaatgtagaatggggtcaagat
aatgcattaccttctgaaaatgtaggttggggtcaagatgataatgtggaatggggtaaa
gataatgcattaccttcggaaaatgtagggcgtggccaagatgataatgtagaatggggt
caagataatgcattaccttctgaaaatgttggatggggtcaagatgataatgtagaatgg
ggtcaagactcatcccagtttgagatccctaaacctgttacagatgaagcggaatggtct
gatgggtggaagaattaa
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