Lupinus angustifolius (narrow-leaved blue lupine): 109332854
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Entry
109332854 CDS
T04664
Name
(RefSeq) polyadenylate-binding protein 8-like
KO
K13126
polyadenylate-binding protein
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03015
mRNA surveillance pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109332854
09123 Folding, sorting and degradation
03018 RNA degradation
109332854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109332854
03041 Spliceosome [BR:
lang03041
]
109332854
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109332854
mRNA cycle factors
Stress granule specific factors
109332854
Spliceosome [BR:
lang03041
]
Complex C
Other components
Complex C specific factors
109332854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_3
RRM_7
RRM_MARF1
PABC_AtC3H46
DUF5062
GH97_C
FANC_SAP
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
109332854
NCBI-ProteinID:
XP_019423497
UniProt:
A0A1J7FZ29
LinkDB
All DBs
Position
LG18:9005578..9010589
Genome browser
AA seq
644 aa
AA seq
DB search
MAQVQAQNVVQGPNGGAGAGAENQLVTTSLYVGDLDPSVTDSQLYDLFNQLGQVVSVRVC
RDLTTGRSLGYGYVNYSNPQDAARSLDVLNFTPLNNKSIRIMYSHRDPSIRKSGSGNIFI
KNLDRAIDHKALHDTFSSFGNILSCKVATDSSGNSKGYGFVQFDNEESAQKAIEKLNGML
LNDKQVYVGPFLRKQEREVSVDKVKFNNVFVKNISESTTDDELKKVFGEFGPITSAVVMR
DGDGKSRCFGFVNFENTDDAAQAVDALNGKKFDEKEWYVGKAQKKSEREQELKIKFEQSV
KEAADKYQGANLYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTP
EEASRALAEMNAKLVVSKPLYVTLAQRKEDRRARLQAQFAQMRPLAIAPSAAPRVPLYPP
GGPGIGQQIFYGQGPPAMIPSQPGFGYQQQLVPGLRPGGAPVPNFFLPMVQQGQQGQRPG
GRRVGGVQQSQQPVPLLPQQMLPRGRVYRYPPPGRGIPEVAGGMFSVPYDVSGVPIRDAG
LSQQIPIGALASALANASPEQQRTMLGENLYPLVEQLEPENAAKVTGMLLEMDQTEVLHL
LESPEALKAKVGEAIEVLRNVAQQQAGGAADQLSSLSLNDNLVS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttcaggctcagaatgtggtgcagggtcctaatggtggtgctggtgctggt
gctgagaaccagttagtgacgacgtcgctttacgtcggagatcttgaccctagtgtgacg
gattctcagctctatgacctgttcaaccagttgggtcaggttgtgtctgttagggtttgc
agggacttaaccactgggagatcgctcggttatggctacgtcaattacagcaacccccaa
gatgctgccagatcattggatgttctgaacttcactcctctcaacaacaagtccatccgt
atcatgtactctcaccgtgatcccagtattcgtaaaagcgggtcaggaaatatttttatc
aagaatttggacagggcaattgaccacaaggcattacatgataccttttcttcatttggg
aacatcctttcttgcaaggtggctacagattcatctggtaactcaaaaggctatggcttt
gttcaatttgataatgaggaatctgctcaaaaagccattgagaagctgaatggcatgctg
ctgaatgataaacaagtttacgtgggacccttccttcgcaagcaagagagagaagtttca
gttgacaaggtcaaattcaacaacgtttttgtgaagaacatatctgagtcaaccactgat
gatgaactgaagaaggtttttggtgagtttggaccaattaccagtgctgtagtgatgagg
gatggggatgggaaatcaaggtgctttggatttgtgaactttgagaatactgatgatgct
gctcaagctgtcgatgctcttaatgggaaaaagtttgacgaaaaggagtggtatgttgga
aaagctcaaaagaaatctgagagggagcaggagttgaaaattaagtttgagcagagtgtg
aaggaagcagctgataaatatcaaggagcaaacttgtatgtgaaaaatttagatgatagc
attggtgatgaaaaacttaaggagctgttctccccttttggtaccatcacctcttgcaag
gttatgagagaccctaatggtataagtcgaggatctggatttgttgcattctcgacccct
gaggaggcatctagagctctcgcggagatgaatgccaaattggtggtaagcaaacctcta
tatgtgactctggcccaaaggaaagaagatagaagagctagactgcaggctcaatttgcg
caaatgcgccctcttgcaattgcaccctctgctgctcctcgtgtgccattgtatccccct
ggtggtccaggtattggtcaacagatattttatggtcaaggccctcctgctatgattcct
tcccagcctgggtttgggtatcaacaacaacttgtgcctggtttgaggcccggtggagct
cctgtgccaaatttctttttgccaatggttcagcagggacaacagggtcagcgcccaggt
ggaagacgtgtcggtggagtccagcagtcccagcagccggttcctcttctgccacagcag
atgcttcccaggggacgtgtgtatcgttatcctccccccggtaggggcattcctgaagtt
gctggaggcatgttttctgttccatatgatgtcagcggagtgccgatccgtgatgcagga
ctctcccagcaaattcctatcggagctttggcttctgctctggcaaatgcttctccagag
cagcagaggacgatgctgggtgagaatctttaccctctggtggaacagttggagcccgaa
aatgctgccaaggtgactggcatgcttctggagatggaccagactgaagttctgcacttg
cttgagtcacccgaggccctgaaagcgaaagtaggtgaggcgatcgaagtcctgaggaat
gtcgcacagcagcaggctggtggtgcggctgatcagttgtcttcattatcattgaacgac
aaccttgtttcttga
DBGET
integrated database retrieval system
