Lupinus angustifolius (narrow-leaved blue lupine): 109334043
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Entry
109334043 CDS
T04664
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109334043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109334043
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109334043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
ChlamPMP_M
Motif
Other DBs
NCBI-GeneID:
109334043
NCBI-ProteinID:
XP_019425162
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Position
LG19:complement(2924686..2929606)
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AA seq
304 aa
AA seq
DB search
MGLPNASDDLSSEMEVDAFRRLFPLRFFERHLAESIRPDGRPLGKARDTSVFLGAVASAN
GSALAKIGSTTMLTAIKMEVMTPSLESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVIS
KQLSDTISSSGLVNLKELSLVNGKAAWMAYLDVYCLDADGALFDAALLSAVSALSHLQIP
AVAINDDGKIVLMYEEDGQKQAQEQVNKEKRKLTLKSIPFSLTSILHKNYILADPTAEEE
SIMETLVTIALDSSGQLISLYKPGGSVLAYTAALQDCVALTRQRVKELKSILDEQNSVME
IEQD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggggcttccaaatgcttcggatgacttgtcatcagaaatggaggttgacgcctttaga
cgcctcttcccacttcgattttttgaacgtcatcttgctgaatctatacggcctgatggt
agaccacttggaaaagctagagatacaagtgtatttcttggtgctgtggcgtctgctaat
ggttcagctcttgcaaagattggatcaactactatgttgactgctattaaaatggaagtt
atgactccttccttggaatcacctgatgagggctgtattgctattgatttccatatgcct
ccaatttgttcgccaattgttaggccgggaaggcctgctgaagctgcaccagttatatca
aagcagttgtctgacacgatttcaagttctggactggttaatttgaaagaattgtctctg
gtcaatggaaaagctgcatggatggcttacttggatgtctactgtttggacgctgatggt
gctctttttgatgctgctttactttctgcagtttctgccttatctcatttgcaaattcct
gctgttgcaattaatgatgatggcaaaatagtactcatgtatgaggaggatgggcaaaag
caggcgcaagagcaagttaataaggagaagaggaaacttacattgaaaagcattccattc
tcattaacaagcatacttcacaagaattacatcttggcagatcctactgcagaagaagaa
tccattatggaaacccttgtgactatagctttggattcatccggtcaactcatatctctt
tacaagcctggtggatcagttcttgcttatacggctgctcttcaggactgtgtggcattg
acaaggcaaagggtaaaggaactaaagagcatcttagatgaacaaaattctgttatggag
attgagcaggattag
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