Lupinus angustifolius (narrow-leaved blue lupine): 109334213
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Entry
109334213 CDS
T04664
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109334213
03009 Ribosome biogenesis [BR:
lang03009
]
109334213
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109334213
Spliceosome [BR:
lang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109334213
Ribosome biogenesis [BR:
lang03009
]
Eukaryotic type
Pre-60S particles
Helicases
109334213
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ARTD15_N
Motif
Other DBs
NCBI-GeneID:
109334213
NCBI-ProteinID:
XP_019425395
UniProt:
A0A4P1QQ62
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All DBs
Position
LG19:complement(8225533..8312810)
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AA seq
760 aa
AA seq
DB search
MAPSFVFEPASDEEVEHSESEQDNENENSEPESEDDYDVDDPESEELDEEPRRIIPVTNK
KTQSPWDFAKYSESVAEEHSRRSTTSVDEKISKVINQRSVPLTVPTQEEDTDTSDSEPED
KQEDYRPEEEDEEDDNVGDNKPFFAPSDGASFDADSFMQLNLSRPLLRACEALGYAKPTP
IQAACVPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRMHAIRVLILTPTRELAV
QVHSMIEKLAQFTDIRCCLVVGGLSTKVQEVALRSMPDIVVATPGRMIDHLRNSMSVDLD
DLAVLILDEADRLLELGFSAEIQELVRSCPKKRQTMLFSATMTEEVDELIKLSLSKPLRL
SADPSAKRPATLTEEVVRIRRMREVNQEAVLLAMCSKTFTARVIIFSGTKQAAHRLKIIF
GLAGLKAAELHGNLTQAQRLEALEQFRKQQVDFLIATDVAARGLDIIGVQTVINFACPRD
LTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRTVAEQSILKWSHMI
EQMEDQVAEVLQEEREERVLRKAEMEATKAENMITHREEIYSRPKRTWFVTEKEKKLGAK
AAKASVDKGRNSGKEVISAEQADDIKMKEKRKREREKNLPRRMRRKLEASREMLEDDEHA
NEQEAKGSNKKEKGGLSLVDLAYRRAKAVKAVKKALDNGKIVKSKKKSSRPPQKTSSRTE
EMRELFQTEIKDKKPNRRGDGAAKKSKKSSFKSKSRYKRK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggctccttctttcgtattcgaacccgcaagcgatgaagaagtagaacactccgaatcc
gaacaagacaatgaaaatgaaaactcagaaccagaatcagaagatgattatgatgttgat
gatcctgaatcagaagaacttgatgaagaaccacgaagaataataccagttaccaataag
aaaacacaatctccttgggatttcgctaaatactctgagtctgttgctgaggaacattct
cgacgaagcacaacttctgttgatgagaaaatctctaaagttatcaatcaacgttcggtg
ccgctgactgttcctacacaagaggaggatactgatacctcagattctgaaccggaagat
aaacaagaggattatagaccagaagaggaagatgaagaagatgataatgttggtgacaac
aagcccttttttgctccttctgatggagcttctttcgatgctgattcattcatgcagctt
aatttgtcccgacctttgctccgggcttgtgaggccctggggtatgctaagccaacacca
attcaggcagcgtgtgttccacttgcattgactggtcgtgatatatgcggaagtgccatc
actggatctgggaagacagccgcatttgcactacccactttagagaggttgttgttccgt
ccaaaacgtatgcatgcaataagggtcctcattctcactccaaccagagagttggctgtt
caagttcacagtatgattgagaagcttgctcagtttactgacatcaggtgttgcctggtt
gttggaggtctatcaacaaaggtccaagaggttgcattgagatcaatgccagacattgtt
gtagctactccaggacgtatgatagaccatttacggaattctatgtcagtggatttggat
gatcttgctgttctaatccttgatgaggctgatcgtcttttagagcttggatttagtgct
gaaattcaagaacttgttcgctcctgtccgaaaaaaaggcagacaatgctattttcagca
accatgactgaggaggttgatgagcttattaaactttccctgtcaaaaccattacgtctt
tctgctgacccatctgcaaagcgaccggcaaccttaactgaggaggttgttaggatacga
agaatgcgtgaagtaaatcaggaagcagttcttcttgcaatgtgctccaaaacttttact
gctagagtgatcatcttcagtgggacaaagcaagcggcacataggttgaaaattatattt
ggattagctggcttaaaagctgctgagcttcatggaaatcttactcaggcacagcggctt
gaagcattggaacagttcagaaagcagcaagttgattttttgattgcaactgatgtggct
gctcgtggtcttgatattattggtgttcaaacagttatcaactttgcatgtccacgtgat
cttaccagctatgttcatcgagtgggtcgtaccgcaagagctgggagagaaggatatgct
gtcacatttgttaccgataatgaccgatcacttctaaaagccatagcaaagagagctggt
tcaaagctgaagagccgtactgttgcggagcaatctatacttaaatggtctcatatgatt
gagcaaatggaggatcaagttgctgaagtacttcaagaagagagggaagaaagagtccta
aggaaagctgaaatggaggccacaaaggctgaaaacatgattacgcatcgggaagagatc
tattcccgccctaaaagaacctggtttgtcacagagaaggagaagaagcttggtgcaaaa
gcagcaaaggcatctgtggataagggaaggaattctggaaaggaggtaattagtgccgaa
caagcagatgatatcaaaatgaaggaaaagaggaagcgggagcgggagaaaaatttgcct
agaaggatgcgtagaaaattggaagcctctagagagatgttggaggacgatgagcatgcc
aatgagcaagaagctaaggggtcaaataagaaagaaaagggtggattgtcacttgttgat
cttgcttatcgacgggcaaaagcagtgaaggctgtcaagaaggctctagacaacggaaaa
attgtcaagagtaaaaagaaatccagtcgtcctcctcaaaagacttcttcaaggaccgaa
gagatgcgggagctgttccagactgagataaaggataaaaagccaaatagaagaggtgat
ggagcagcaaagaagtccaagaagagttcattcaaaagcaagtctaggtacaagcgcaag
tag
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