Lupinus angustifolius (narrow-leaved blue lupine): 109334282
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Entry
109334282 CDS
T04664
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109334282
03015 mRNA surveillance pathway
109334282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109334282
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109334282
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109334282
NCBI-ProteinID:
XP_019425512
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All DBs
Position
LG19:complement(728319..733728)
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AA seq
404 aa
AA seq
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MAKPGRLRRSPSSSRSSSRSRSSSRSRSRSRSFSSSSSSPSRSPIRSPPPHRRKSPAEAA
RRGRSPPPPFKRTSPPPRKPSPIRESLVLHVDKLSRNVNEGHLKEIFGNFGEVVSVELAM
DRAVNLPKGYGYVQFKTRDDAEKALSYMDGAQIDGNIIKARFTLPPRQKVSPPPKASAVA
PKRDAPKTDNASADAENDGSKRQKESASPRRKPLSPRRRSPVPRRVGSPRRPDSPRRRAD
SPVRRRLDSPPYRRGDTPPRRRPISPGRGRSPSPPRRPRSPARVSPRRMRGSPGRRRSPP
PPRRRSPPRRARSPPRRSPIGRRRSRSPVRRSARSRSRSFSPRRGRPPVRRGRSSSYSDS
PSPRKIRRSKSRSPRRPLRGRGSSNSSSSSSPLPPPPPHPPRKP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacctgggcgacttcgtcgttcaccatcatcctctcgatcttcctctcgttct
cgctcctcttctcgttctcgttctcgctccagatccttctcttcatcttcttcctcgccc
tctcgcagccctattcgatcccctcctcctcacagaagaaagagtcctgctgaagcagct
agacgaggtcgatctcctccacctccgtttaaaagaacttctcctcccccaaggaagccg
tctcctatacgtgaatcacttgttctgcatgtggataaactaagcagaaatgtcaatgaa
ggccatttgaaagaaatttttggtaactttggtgaggttgtaagtgtggagttggcaatg
gatcgagctgttaatcttccaaaaggttatggatatgtgcaattcaagacaagagatgat
gctgaaaaagcattgtcatacatggatggtgcccaaatagatggcaacatcattaaggca
agatttactctacctcctcgacagaaagtttcaccgcccccaaaggcttctgctgtagct
ccgaagagagatgcacctaagactgataatgctagtgcagatgctgaaaatgatgggtca
aagcggcaaaaagaatcagcgtctccacggagaaaacctctctcaccaagaaggagatct
cctgtgcctcgaagagttggatcgccaagaagaccagattctcctcgccgtcgtgcagat
tctcctgttcgtcgtcgattagactctcctccttatcgtcgtggagacacacctcctagg
aggaggcccatatctcctggaagaggccgttctccatctccgccaaggcgccctagatct
cctgcaagagtctcacctagaaggatgcgtggaagcccaggtcgcagacgttctcctcct
cccccaaggcgccgttcaccacctagacgagcccgtagtcctcctagaagatctccaatt
ggtcgtaggcgcagtcgctctccagtacgtaggtctgcacgctcacgttcgagatcattc
tcacctcgaaggggtcgaccacctgtgagacgtgggaggtcatcatcctactctgattca
ccaagtccacgcaagatccggcgatcaaagagccgcagtcccagaaggcctttgagagga
agaggcagtagcaacagcagcagtagcagttcaccactcccaccaccacctccgcatcca
cctcgcaaaccatag
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