Lupinus angustifolius (narrow-leaved blue lupine): 109334382
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Entry
109334382 CDS
T04664
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109334382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109334382
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109334382
mRNA degradation factors
5'-3' decay
Decapping complex
109334382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
109334382
NCBI-ProteinID:
XP_019425677
LinkDB
All DBs
Position
LG19:complement(9885038..9896326)
Genome browser
AA seq
1384 aa
AA seq
DB search
MASPGNNPNQPPSPQPPFDMHSFFNPTNSNPNPNHNQNNLPFPPPSSSSSSYPLPTAFSA
AQFYPQHPHFLPSYDHHLHHQQQQQQQQQQQHRSLSFPTPPLQPQPIPPPSNPNAGARLM
ALLSAPPQPSSASTPTPFSHPDFPTAPPLAMFTAANAAVGALNREQSSKIPKGRHLTGDH
IVYDLDARQPGEVQPQLEVTPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIRN
AVRSLLRGHTLRVTDLSFFAEDVHLLASVGADGRVYVWKISEGQDVEDKPQITADIVIAI
QIAGEENVENPRICWHCHKQEILIVGMGKYVLRIDTTKVGNGEAFVAEDPPRCPVDKLID
GVQLVGTHDGEVTDLSMCQWMRNRLVSASQDGTIKIWEDRKTQPLAVLRPHDGNPVFSAT
FLLAPHRPDHIVLITAGPQNRVVKLWVSASEEGWLLPSDDESWKCTQTLELMSSAQPCLR
DAFFNQVAALPHAGLLLLANAQRNAIYAMHLEYGSYPESTRMDYIAEFTVTMPILSFTGT
HDISPQGEHIVQVYCVQTQAIQQYALDLALCLPPSLDNMGLEKSDSVVSRDAITAEVFTS
LESFAARASDTSLPSSAPKTVVQATSTESAHVARYPFSSGHIEAPASKEVSSSNTEAKPV
TLAPSSSDADIVCVPSPPLPLSPRLSRKLSDFRNPQSNLGDHSGEQPVNDYSVDRQMDTI
HRNLFDVSTLNNDSKIDEKKVKQSDISGVLNPSVMFKQPTHLVTPSEIIKAGSPSETNMI
DRKGEGEAKIQDVTDVGNTEVEVKVVGEARSNQCNEFDLQGPQQNLLSDSKEKFLCSQAS
DLGIEIAQESRAITEEAYISEELGQDDSTVGDSLTQPSNALEDGLQEAKDVHEKVSDSST
SMTVPPSPSPNIKGKKQKGKISQASSPSSPSPSVYNLNDSSNEPSGSSSLLSAENASPQM
LAMQESLNQLLSMQKEMQKQLTMMVAVPVTKEGRRLEASLGRSMDKAVKANTDALWARIQ
EENAKTEKFLRDRIQNITGLISNFINKDLPAMLEKTVKKEMASVGSAVVRSMSPAVEKII
SSTIVESFQQRGVGDKAVNQLDKSVTSKLEATVARQIQAQFQTTGKQVLQDALKSSFETS
VVPAFEMSCKAMFDQVNATFQNGMAEHSSAVQQRVESGHTSLAMTLRDSINSVSSVTQTL
NREVVEGQRKLLALAAARPNSGTLNPLTIQLNSGPLLHEKVDVPLDPTQELSRLVSERKY
EEAFTAALQRSDVSIVSWLCSQVDLHGLLSMVPLPLSQGVVLSLLQQLACDISNDTPRKT
AWMTDVAAAINPSDPMITLHVRPIFEQVYQILNHQRSLPTMTGADLSSIRLLLHVINSMR
MTCK
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccccggcaacaaccccaaccaaccaccgtcaccacaaccacctttcgacatg
cactctttcttcaatcccactaactcaaaccctaatcctaaccataaccaaaacaatctc
ccattccctcctccctcttcttcttcctcctcctaccctctccctaccgcattctccgcc
gcccagttctaccctcaacaccctcacttcctcccctcctacgaccaccacctccaccac
caacaacagcaacagcaacaacaacaacaacagcaccgctctctctccttcccgactccc
cctctccagccccaacccatcccccctccttccaaccccaacgcaggcgcccgcctcatg
gccctcctcagcgccccgccccaaccttcctccgcctccaccccgaccccattctcccac
cccgacttccccactgccccgcccttggccatgttcacggccgccaatgctgctgtgggc
gcgctcaatcgggagcagagcagtaaaatccctaaaggaaggcacctgacgggtgaccac
attgtgtatgatttggacgccagacagcctggtgaggtgcaacctcagctcgaggttacg
cccataacgaaatatgggtcggatcctaacccggttttgggtcgacagattgcagttaat
aagtcgtatatttgctatggtttgaagcaggggaacatcagggtgctcaatattcgcaac
gcagttagatcattgctgagaggacacactctgagggtcacagacttgtctttctttgca
gaagatgttcatctcttggctagtgttggcgcagatggccgtgtctatgtgtggaagatc
tctgaaggtcaagatgttgaagataagcctcaaattactgcagatattgttattgctatt
caaatagcgggagaggagaatgttgaaaatcctcgaatttgctggcactgccacaaacaa
gagattttaatagttggcatgggaaaatatgttctcagaattgacactacaaaagttgga
aatggtgaagcctttgtggcagaggatcctccaagatgtcctgttgacaagctcattgat
ggggttcagcttgtaggcacccatgacggagaggtgactgatctgtcaatgtgtcaatgg
atgagaaatcgattggtatctgcatcacaggatggcacgataaaaatctgggaagatcgc
aagacacaaccacttgcggtgttaagaccacatgatgggaatccagttttttctgctaca
tttttacttgctccacaccggcctgatcatattgtccttatcactgcaggaccacagaat
cgtgtggtaaaactttgggtctcagcaagtgaagaaggctggctgctcccaagtgatgat
gaatcatggaaatgcactcagacgttggagttgatgagttcagctcaaccatgtctcagg
gatgcattctttaatcaagttgcagcattgcctcatgcaggtctgcttttacttgcaaat
gcccagaggaatgctatttatgctatgcacttagaatatggttcttatccagaatctaca
cgcatggattatatagctgagtttactgtgaccatgcccattctgagttttactgggaca
catgatatttcacctcagggtgagcatattgttcaggtttattgtgttcagacacaggct
attcagcagtatgctttggatttagccctttgtttgcccccgtcattggataatatggga
ctagagaagtcagattctgttgtttccagagatgcaattactgctgaagtattcacctct
ctagagtcatttgcagctagggcgtctgatacgtctttacccagttctgctcccaaaaca
gtggtacaagcaacgagcactgagagtgcgcatgtggcaagatacccttttagctctggc
catattgaggcacctgcttctaaagaagtcagcagttccaatactgaagctaaacctgtc
acactggctccatccagtagtgatgctgatattgtttgtgttccatctcctcctcttcct
ttgagcccaaggctgtctaggaaactttctgattttaggaatccacaatctaacttaggt
gatcatagtggggagcaacctgttaatgattactcagttgatagacaaatggacaccatc
cataggaacttgtttgatgtatcaacattgaataatgattcaaagattgatgaaaagaaa
gtcaaacagagtgacatttctggtgtacttaatccttctgtcatgtttaagcagccaact
catctagttacaccttctgaaatcattaaagctggttctccctctgagactaatatgatt
gatagaaagggtgagggagaagcgaaaatccaggatgtgactgatgtgggtaatactgaa
gtggaagtgaaagtggttggtgaggccagatctaatcaatgcaatgaatttgacctgcag
gggccacaacaaaacctactttctgatagtaaagaaaaattcctttgctctcaggcttca
gatcttggtattgagattgcccaagaaagtcgtgcaataactgaggaggcttacatttca
gaggaacttggacaagatgattctacagtaggggactcactaacccaaccttctaatgcg
cttgaggatggactccaagaggcaaaagacgtccatgaaaaggtttctgactcatctaca
tccatgacagtgccaccttcaccttcacctaatattaaaggtaagaaacaaaaaggcaaa
atttctcaagcatcaagtccatcttccccatctccaagtgtgtacaatttaaacgattca
tccaatgaacctagtggaagctcaagccttctatctgcagaaaatgcttctcctcaaatg
ctagcaatgcaagaatcgcttaatcagttattgtcaatgcaaaaagagatgcagaagcaa
ttgacaatgatggttgcagttccagttacaaaagaaggtagaaggctcgaggcttctcta
gggagaagcatggacaaagctgtcaaggccaacactgatgctttgtgggctcgaattcaa
gaggagaatgcaaaaactgaaaagttcttaagagatcgtatccagaatattacaggtttg
attagtaactttattaataaggatctaccagcaatgttagagaaaacagtgaagaaggaa
atggcttcagttgggtcagctgtagtccgttcaatgtctcccgctgtggaaaaaataata
tcttccaccattgtggagtcattccagcagagaggagtgggtgataaggctgtgaatcaa
cttgataaatcagttacttcaaagcttgaagctactgttgcaaggcaaatccaagcacag
tttcagacaactggcaaacaggtgcttcaggatgcactcaaatccagttttgaaacatca
gtggttccagcattcgagatgtcttgcaaagccatgttcgatcaagtaaatgctacattt
caaaatggcatggctgaacattcatctgctgtgcagcaacgtgttgaatctgggcacact
tcattggcaatgactctaagggattccattaattctgtgtcatcagtgacacaaacgttg
aacagagaagtggtcgagggccagagaaagctattggcacttgcagctgcaagaccaaac
tcgggcactttaaatcctttaaccatacagctgaatagtggtcctttacttcatgaaaag
gttgatgtgccactagatcccacgcaagagctatcaaggctggtatctgaaaggaaatat
gaggaggctttcactgcagctctacaaagaagtgatgtatccattgtttcttggttatgt
tctcaggttgatttacatggacttttgtcaatggttcctctcccattgagccagggagta
gtgctttcacttctgcagcagctggcttgtgatattagcaatgatacaccccgaaagacg
gcttggatgacagatgtcgctgctgctataaatccctcagacccgatgattacattgcat
gtgcgacccatctttgagcaagtctatcagatactgaatcatcaacgaagcttgccgacg
atgaccggagctgatctctcaagtatccgtcttttgttgcatgtcatcaactctatgcgt
atgacatgtaaatga
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integrated database retrieval system
