Lupinus angustifolius (narrow-leaved blue lupine): 109334719
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Entry
109334719 CDS
T04664
Name
(RefSeq) FHA domain-containing protein DDL-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03015
mRNA surveillance pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109334719
09122 Translation
03013 Nucleocytoplasmic transport
109334719
03015 mRNA surveillance pathway
109334719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109334719
03041 Spliceosome [BR:
lang03041
]
109334719
03009 Ribosome biogenesis [BR:
lang03009
]
109334719
03012 Translation factors [BR:
lang03012
]
109334719
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109334719
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109334719
mRNA cycle factors
Stress granule specific factors
109334719
Spliceosome [BR:
lang03041
]
Complex C
Other components
EJC/TREX
109334719
Ribosome biogenesis [BR:
lang03009
]
Eukaryotic type
90S particles
Helicases
109334719
Translation factors [BR:
lang03012
]
Eukaryotic type
Initiation factors
eIF-4
109334719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
FHA
ResIII
AAA_19
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-GeneID:
109334719
NCBI-ProteinID:
XP_019426174
LinkDB
All DBs
Position
LG19:complement(3829937..3843385)
Genome browser
AA seq
524 aa
AA seq
DB search
MAKRRRAALEAEDADFETTEGVKAIGSFEEMGIKDDLLRGIYQYGFEKPSAIQQRAVTPI
IQGRDVIAQAQSGTGKSSMIALTVCQIVDTSVREVQALIVSPTRELASQTEKVILAIGDF
INIQAHACIGGKSEGEDMSKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEM
LSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLELKR
TQSDRERGRKRESESERSHGSGRGRGSDREERKEKKKVENNEFDDDDDNGRRNNRSLKSR
HERSPEHHRNGKRSHRSHSPPQPHASTAANGKPLDEVTNSRGAEQMNDEDDSVAKMKAAE
EALEEKQKQKPSFELSGKLAAETNRFRGVTLLFNEPPEARKPDIKWRLYVFKAGEVLNEP
LYIHRQSCYLFGRERRVADIPTDHPSCSKQHAVIQFRQVENEEPDGTVSKQIRPYIMDLG
STNKTFVNESPIEPQRYYELRERDTIKFGNSSREYVLLHENSIG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacggaggagggcagcgttagaggcggaggatgcggatttcgagacgacggaa
ggagtaaaagcgatagggagctttgaagagatgggaataaaagatgatcttcttcgaggg
atttaccaatacggttttgagaaaccttctgctattcagcaacgggccgtgacgccaatc
atacagggccgtgacgtcatcgctcaggcccagtccggtaccggaaaaagttccatgatt
gctctcactgtttgtcagatcgttgatacctccgttcgagaggtgcaagccttaatagtg
tctcctacaagggaactggcttcacagactgaaaaggttatattagcaattggggacttc
attaatatacaagcacatgcatgcattggtggtaaaagtgagggagaagatatgagcaag
ctggagtatggagttcacgtggtatctggaactccaggacgggtttgtgacatgatcaaa
aggagaacattgcgcacaagagctatcaagttactagttctggatgaatctgatgaaatg
ttgagcagagggtttaaagatcaaatttatgatgtgtacagatatctcccaccagacctt
caggtggtcttgatttctgctacccttcctcatgaaatactggagatgacaaataagttc
atgacagatccagtaaggatccttgttaaacgtgatgaattgacattggagttgaagaga
actcagtcggatagagaacgagggcgcaaacgtgagagcgagagcgagaggagccatggg
agtggaagaggaagaggttcagatagagaagagaggaaagagaagaagaaggtggaaaac
aatgagtttgatgatgatgatgataatgggagaaggaacaataggtcgcttaagtctcgg
catgaaaggtcgccggagcaccatcggaatgggaagagaagccataggtctcactctcca
ccgcaacctcatgcctccactgctgcaaatggaaaacctctcgatgaggtaacaaactcc
agaggagctgaacaaatgaatgatgaggacgactctgttgcgaagatgaaggctgctgag
gaagctttagaagagaaacaaaagcaaaaaccttcatttgaactatctggaaagcttgca
gctgaaacaaatcgattcagaggtgttactttgttgttcaatgagcctccagaagctcga
aaacctgatattaaatggagactttatgttttcaaggctggtgaagtgctaaacgagccc
ctatatatacatcgacaaagctgttatctttttggaagggaaagaagggttgctgatatc
ccaacagaccatccatcttgcagcaagcaacatgctgttattcaattccggcaagttgaa
aatgaggaacctgatggtacagtatcaaagcaaataaggccttacataatggatctcgga
agcacaaacaaaacttttgttaatgagagtcccatcgaacctcaacgatactacgagctt
agggaaagggacaccattaaatttggtaatagtagccgagaatatgtattactacatgag
aactcaatcgggtaa
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