KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109334896
Entry
109334896         CDS       T04664                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013  Nucleocytoplasmic transport
lang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109334896
  09122 Translation
   03013 Nucleocytoplasmic transport
    109334896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lang03019]
    109334896
   03041 Spliceosome [BR:lang03041]
    109334896
Messenger RNA biogenesis [BR:lang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109334896
Spliceosome [BR:lang03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109334896
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR41 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_ACSF4 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st PKD
Other DBs
NCBI-GeneID: 109334896
NCBI-ProteinID: XP_019426435
UniProt: A0A1J7FV90
LinkDB
Position
LG19:complement(12926178..12932032)
AA seq 372 aa
MCGDATNWDEDGYKESILKERDFQTRTVFRTAWAPSLNPNPDTLLVASSDGSIASYSISS
CISNLNTHSGLSNTNNDRLLAQPSCFIQGHDGPTYDLKFYGDGEDALLLSCGDDGRIRGW
RWKELTGSNCSVSSHGNDINPILDLVNPQHRGPWGALSPIPENNAIAVNTKEGSIFAASG
DSYAYSWDLETGKVKMVFKGHSDYLHCIVARNSSNQIITGSEDGTARIWDCKSGKSVQVI
NPGKDFKLEGSVSWVGCVALDASESWLACSRGRNISLWNLPASECISRISSQATVQDMLF
ENNQILAVGADPILNRFDMNGVILSQIQCAPQSAFSISLYPTGVVAVGGYGCCVDVISQF
GSHMCTFHCQCV
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgtgcggtgacgcaactaactgggacgaagatggttacaaagaaagcatactgaaggag
agagactttcaaacacgaaccgttttcagaaccgcttgggctccttctctgaaccctaac
cctgatactctcctcgttgcttccagcgacggttctatcgcctcatactcaatctcttcc
tgcatctctaatctcaacactcattccggtttatccaataccaacaacgataggttattg
gctcaaccaagttgcttcattcaaggccatgatggacctacatacgatctcaaattctat
ggtgatggtgaagatgctttgttgctaagttgtggtgatgatggtcggatccgaggatgg
agatggaaggaacttacaggctcaaattgttctgtttcttcacatggaaatgatatcaat
cctatacttgacctggtgaatcctcaacacagaggtccttggggtgcgctttcacctatc
cctgagaataatgctattgctgttaatactaaggaggggtctatttttgctgcttctggt
gattcttatgcatattcttgggatttggaaactggtaaagtaaaaatggtcttcaagggg
cactcagactacttgcattgtatagttgctcgcaactcatccaatcagatcataacaggt
tcagaggatgggaccgcacgaatttgggattgcaaaagtggaaagtctgtccaagttatt
aacccaggaaaagattttaaattagaaggatctgtttcatgggttggttgtgttgcttta
gatgcaagtgagagctggttggcttgcagtcgtgggcggaatatatcactttggaacctt
cctgcttcagagtgcatatcaaggatttcatcccaggctactgtacaggacatgttattt
gaaaataatcaaattttggcagttggtgccgatcctatactcaatcgctttgacatgaat
ggtgtgatcctttcacaaatacaatgtgctcctcaatccgctttctctatctcgctatat
ccaacaggagttgtggcagttggaggttatggatgttgtgtggatgttatctcgcaattc
ggcagccacatgtgtacgtttcattgccaatgtgtttaa

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