KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109335299
Entry
109335299         CDS       T04664                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018  RNA degradation
lang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109335299
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109335299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lang03019]
    109335299
   03041 Spliceosome [BR:lang03041]
    109335299
Messenger RNA biogenesis [BR:lang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109335299
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     109335299
Spliceosome [BR:lang03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    109335299
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 109335299
NCBI-ProteinID: XP_019426976
LinkDB
Position
LG20:1550342..1552485
AA seq 152 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEESKSRTDRKPPGVGRGRGRGGSQDGPGARPAKGIGRGVD
EGGARGQGGSRGGRGGLGGRPGGNRGAGRGRG
NT seq 459 nt   +upstreamnt  +downstreamnt
atgcttcccctttctcttctcaagactgcccaagggcaccctatgttggtggaactgaaa
aatggggagacatataatgggcatttggttaattgtgatacatggatgaacattcatctt
cgagaagtcatttgtacctctaaagatggagatagattttggcgtatgcccgaatgctac
attcgtggcaacacaattaagtaccttcgagttcctgatgaggttattgacaaagttcag
gaagaaagtaagagtcgcacagatcgcaaacctcctggtgtgggacgtggtaggggtaga
ggaggtagccaggatggtcctggtgcacgtccagcaaaaggaattggacgcggtgttgat
gaaggtggggctagagggcaaggaggaagccgaggaggaaggggtggcctaggtggaagg
cccggtggaaacagaggtgcagggcgaggtagaggttaa

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