Lupinus angustifolius (narrow-leaved blue lupine): 109335448
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Entry
109335448 CDS
T04664
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109335448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109335448
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109335448
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109335448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
109335448
NCBI-ProteinID:
XP_019427128
UniProt:
A0A1J7IRG9
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Position
LG02:9938584..9940588
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AA seq
275 aa
AA seq
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MPLLPKSDLIHIREVWNDNLEEEFELIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYDY
HYQTLKDNVDMLKLIQLGLTFSDEEGNLPTRGTNGQCIWQFNFREFNVNEDVFANDSIEL
LRQSGIDFKKNNEMGIDAKRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCKNLP
DTKVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS
CTFRKLKENFFSGSLEKYAGVLYGLGVENGQSSSH
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttttacctaaaagcgatttgattcatattcgtgaggtttggaacgataacctg
gaagaggaattcgagctgataagggaaattgttgatgattacccttacatcgcgatggac
acggaatttccggggattgttcttcgaccagtggggaatttcaagaatagttatgattat
cattaccaaaccctaaaggacaatgttgatatgctcaagttgattcaattgggcctcacc
ttctcggatgaggaagggaatcttcccacgcgtgggaccaatggtcagtgcatttggcaa
ttcaatttccgcgaattcaatgtgaatgaggatgttttcgcaaatgactcgatcgagctt
ttgagacagagtggcattgatttcaagaagaacaatgagatgggtatcgatgcgaagcgg
tttggtgagcttttgatgtcatctgggattgtgttgaatgataatgttcattgggttact
ttccatagtggttatgattttggatacttgttaaagcttttaacttgtaagaatttgcct
gataccaaagttgggttttttaaccttatcaacatgtatttccctacggtttatgacatc
aagcatctcatgaagttttgcaatagccttcatggagggctgaacaagcttgcagagttg
ttggaggtggagagggttgggatttgtcatcaggctggttcggatagtttgctcacatct
tgtacattcaggaagttgaaagagaatttctttagtggatccttggagaagtatgccggt
gtcttgtacgggttaggtgttgagaatggacagagttcttctcattga
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