Lupinus angustifolius (narrow-leaved blue lupine): 109336066
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Entry
109336066 CDS
T04664
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109336066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109336066
03041 Spliceosome [BR:
lang03041
]
109336066
03036 Chromosome and associated proteins [BR:
lang03036
]
109336066
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109336066
Spliceosome [BR:
lang03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109336066
Complex B
109336066
Complex C
U2 SnRNP specific factors
109336066
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
109336066
TFTC complex
109336066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_EML_2
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
109336066
NCBI-ProteinID:
XP_019427968
LinkDB
All DBs
Position
LG20:complement(1964479..1969590)
Genome browser
AA seq
1213 aa
AA seq
DB search
MYLYNLTLQQPTGIVCAINGSFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGS
IRSLAQFRLTGAQKDYIVVGSDSGRIVILDYNKEKNVFDKIHQETFGKSGSRRIVPGQFI
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFENPI
FAAIELDYSEADLDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANLLVTVPGG
GDGPSGVLVCAENFVIYKNQGHQEVRAVIPRRADLPSERGVLIVSAAMHKLKSMFFFLLQ
TEYGDIFKVTLEHDGDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFKAI
GDDDDVEVSSATLEETQDGFKPVYFRPRKLKNLVRIDQVDSLMPIMDMKVSNLFEEETPQ
IFTLCGRGPRSSLRILRTGLAVSEMAVSRLPGIPSAVWTVKKNVIDEFDAYIVVSFTNAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIAKVGYNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFPIIVRGKRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTP
RKFVLHPKRKLLVIVESDQGALTAEERESARKECFEATQAGENGTGSDPMENGGEDEDKD
DALSDEHYGDPKTESDKWVSCIRVLDPRTGNTTCLLELQENEAAFSVCTVNFHDKEYGTL
LAVGTAKGLQFLPRRTLTAGYIHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAGI
GPVLRLYDLGKRRLLRKCENKLFPNTIVSIHAYRDRIYVGDMQESFHYCKYRRDENQLYI
FADDCVPRWLTASYHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGRIKWEQGKLN
GAPNKVEEIVQFHVGDLITSLQKASLIPGGGECILYGTTMGSIGALHAFTSRDDVDFFSH
LEMHLRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPTLPMDLQRKIADELDRTPGE
ILKKLEEVRNKII
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacaatctcactctccagcaacccaccggcatcgtctgcgccatcaacggc
agcttctccggcggcaagtcccaagaaatcgtcgtcgccagaggtaaagttctcgatctc
ctccgccccgatgacaacggtcgcatccaaaccattctctccgtcgaaatcttcggttcc
attaggtccttagctcaattccgtctcaccggtgctcagaaggattacatcgttgtcggt
tcagattccggtcgcatcgtaattcttgattacaataaggagaagaacgtattcgataaa
attcaccaagaaacttttggtaaatctggttcccgccgcatcgttccgggtcagttcata
gctatagatccaaagggtagggctgttatgattggcgcttgtgaaaaacagaaacttgtt
tatgttttgaatagggatactgctgctaggttaactatttcttcgcctttagaagctcat
aagtctcatacattagtgtactcaatttgtggggttgattgtggttttgagaatcctatt
tttgctgctattgagttggattactctgaggctgatttggattccactggtcaggccgca
tccgaagctcagaagcatttgacgttttatgagcttgatttagggttgaaccatgtgtcg
aggaagtggtctgaacaggttgataatggtgccaatttgcttgtcactgttcctggtggt
ggcgatgggccgagtggagtgcttgtttgtgctgagaattttgtgatttataagaatcag
ggacaccaggaagttagggctgtgattcctcggcgtgctgatttgcctagtgagcgtggt
gttcttattgtctcggcagctatgcataagttgaagtccatgtttttcttcctcttgcag
accgagtatggagatatttttaaggttaccttggagcatgatggtgaccgtgtctcggag
ttgaagattaagtattttgatactattcctgttacagcttcaatgtgtgtgctcaagtcg
ggcttcttgtttgcagcctcggagtttggcaatcatgctctgtatcagtttaaggcgatc
ggggatgatgacgatgtggaggtgtcatcagctacattggaggaaactcaggatggtttt
aagccggtctatttcaggccgagaaaactgaaaaatcttgtcaggattgaccaggttgat
agtctaatgccaataatggatatgaaggtcagtaatctctttgaagaggaaaccccccag
atttttactctctgtggccgtggtcctcgttcatccttgaggatcctgagaactggttta
gcagttagtgagatggcagtatcaaggcttcctggtatacctagtgctgtttggactgtg
aagaagaatgttatcgatgagtttgatgcatatattgttgtgtcattcacaaatgctacg
cttgtgctttccattggtgagacagttgaagaagttagtgacagtggatttcttgacacc
acaccctcccttgctgtatccttgataggtgatgattctctcatgcaggttcaccctaat
ggtattagacacattagggaggatgggcgtattaatgagtggagaactcctggaaagagg
acaattgccaaagttggatataatagacttcaggttgttattgcactgagtggaggggag
cttatatattttgaagtggatgttactggtcagttgatggaggttgaaaagcatgaaatg
tctggagacgttgcttgtttggacattgctccagtacccgaaggcagacaaagatcccgt
tttctggcagtaggctcatatgacaagactatccgaatcttatcactggatcctgatgat
tgtatgcaggctcttagtgttcaaagtgtttcttcagctccagaatctcttctttttctt
gaggttcaagcttctgttggcggcgaggatggtgcagatcaccctgctagccttttcttg
aatgctggtttgcagaatggtgtcttgtttagaacggtggtggatatggttacaggtcag
ctttctgattctcgttcccgattcttaggattgagagccccaaagttgtttcctattatt
gtaagaggcaagcgtgccatgctttgcttgtcaagtcgaccatggcttggttatattcac
cagggacatttcctattaacacctctttcatatgaaacccttgaatatgcggcttcattt
tcgtctgaccaatgtgtggaaggtgtagttgctgttgctggtgaggcattgaggattttt
accattgaaagattgggagaaacatttaatgagactgtaattccattaagatatacacca
agaaagtttgtgctgcatcccaaacggaagcttttggtgatagttgagagtgatcaagga
gcattaactgcagaggagcgtgaatctgcaagaaaagagtgttttgaggctactcaggca
ggggaaaatgggactggaagtgacccaatggagaatggtggcgaggatgaggataaagat
gatgcactctctgatgaacattatggtgacccaaaaactgaatcggataaatgggtttcc
tgcattagagttcttgatccaaggacaggaaacacaacatgtcttctggagcttcaggag
aatgaagctgcattcagtgtatgcacagtaaatttccatgataaggaatatggaaccctg
ttagctgttggcacagcaaagggactgcaatttttgcccagaaggactttaactgctgga
tatattcatatatataggtttgtagaggatggaagatctcttgaacttcttcacaaaact
caggttgaaggtgtccctcttgctctatgtcagtttcaaggaagattacttgcaggaata
ggacctgtgctcaggctatatgatttaggaaaaagacgactgttaaggaaatgtgaaaat
aagctattccccaacacaattgtctctattcatgcgtatcgtgatcgtatttatgtaggc
gacatgcaagagtctttccattactgcaagtataggcgggatgaaaaccagctttacatt
tttgcggatgattgtgttccaagatggcttactgcatcataccacatagattttgacacc
atggcaggtgcagacaagtttgggaatgtctattttgtgcgcttgccacaggatgtttca
gatgaaatagaagaagatccaactggtgggaggatcaagtgggagcagggaaagctgaac
ggagctcccaataaggtggaagaaattgtacaatttcatgttggtgatctgatcacgtct
ttgcaaaaggcatctcttataccaggtggtggagagtgcattttatatggaacaactatg
ggaagtattggggcattgcatgcttttacgtcacgggatgatgttgatttcttctctcat
ttggagatgcatttgaggcaggatcatccacctttgtgtggaagagaccacatggcttat
agatctgcttatttccctgttaaggatgtgattgatggagatctatgtgagcaataccca
acattgccaatggatttgcagcgaaaaattgctgatgaattggacagaacccctggagaa
atactgaagaaacttgaggaagtacgaaacaaaattatttga
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integrated database retrieval system
