Lupinus angustifolius (narrow-leaved blue lupine): 109336157
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Entry
109336157 CDS
T04664
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109336157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109336157
Spliceosome [BR:
lang03041
]
Complex A
U1 snRNP components
U1 related factors
109336157
Complex B
109336157
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
FF_RHG35_4th
WW_TCERG1
SMODS
Motif
Other DBs
NCBI-GeneID:
109336157
NCBI-ProteinID:
XP_019428118
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All DBs
Position
LG20:2608339..2624540
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AA seq
1009 aa
AA seq
DB search
MSNNPQFPGLQPLRPPIAGSGDPQRNFAPPMHVQYHHVVPTQQSQQFIPMPSQHYQPIGH
GVPMINVGMPPQNPNPQFSQPIQQLPPRHSQPMPLPPQAIPLPVARPNMHMSSEQKMAQA
DSQAPNVYTSGLGGPGMPLSSSYTFAPSSYGQMQTNFVSTGQYQSVPQVHAHTGSSQSIT
SGTIIQSNGEQPSVTNAMASAISLQPPPAMNDSTDWIEHTSATGRRFYYNKKTKLSSWEK
PYELMTLIERVDASTNWKQYSSPDGRKYYYNKVTKESKWLIPEELKLARAQVEKAAVNGT
YPEAILIPHSQPSASPQVVEATPGADISSLTVPGDPTSPVSVAPVGTTFTNNLQPEITSG
SPASPSVVPQTGTKVEEVEAPGNTVKPSDAGVGRDGASVTDVNTAKTLMDGANNTSVQYT
QGSADGVPAEDKEDGKTDSSREKTDDVASETKVVEPEPLVYVNKMGAKDAFKALLESVNV
GSDWTWDRAMRVIINDKRYGALKTLGERKQAFNEYLNQRKKQEVEEKRMKQKKAREDFKK
MLEESTELTSSTRWSKAVPIFENDERFKALERDRDRRDVYDSFMEDFVIKERARAQVERK
QNLMEFRMFLESCDFIKASTQWRKVQDRIEADERCSRLEKIDRLEIFQDYLHDLAKEEEE
QKKIQKEELRKTERKNRDEFRKLMEEHVAAGILTAKTNWRDYHSKVKDLPAYVAAASNTS
GSIPKDLFEDVVEELEKQYNEEKSRIKDAVKLAKITLSSNWNLEDFKSTISKDISSPPVS
EFNLKLVFDELLERAKEKEEKEAKKRKRLADDFFHLLSSIKDMTASSKWEDYGPLIEDSQ
EFRSIGDENLCKGLFEEYIIQLKEETIENERKRKEEKVKKEKDKEEIERRKGKQRREKEG
GREREKGEAHVKDKAESDGADKRSEDGNRKRRKQHRSPEDISHEKDKDRSKKSHGHSSSR
KKSRRQHGHESDESRHKRHKREHRSDSHREGDHGNLEGGEHGDSVVDRW
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataatccgcaatttccgggcctacagccccttcggcctcccatagctggttct
ggggatcctcaacgcaattttgctccacccatgcatgttcaataccaccatgttgttcct
actcagcagtcacaacagttcattcccatgccttctcagcattaccaacctattggccat
ggagttcccatgattaacgttggaatgcctcctcaaaatccaaacccccaattttctcag
ccaattcaacagttgcctccaagacatagtcagccgatgccactcccaccacaggcaatt
ccattgccagttgctaggccaaatatgcatatgtcgtcagaacaaaaaatggcccaggct
gattctcaagctccaaatgtctacacatcaggtttaggtggcccgggaatgcccctctct
tcatcatatacgtttgcaccatcctcttatggtcagatgcaaaccaattttgtttctacc
ggccaataccaatctgttcctcaggtccatgctcacactggttcttctcagagcattacc
tctggcacaattattcagagcaacggtgaacaaccttcagttacaaatgccatggcttca
gcaatcagtctccagcctccccctgctatgaatgattccacagattggatcgagcatact
tctgcaactgggagaagattttactataataagaagaccaaactatctagctgggagaag
ccttacgaactgatgacactaattgagagggtggatgcgtcaacaaactggaagcagtat
tctagtccagatggaagaaagtattactacaacaaagtcaccaaggaatccaagtggtta
attcccgaggaactaaagttggctcgtgcgcaagttgaaaaggctgctgtgaatggaaca
tatcctgaagctatactgattcctcattctcaaccatctgcatctcctcaagtggttgaa
gcaacacctggtgcagatatttcatctttaactgttccaggagatccaacaagtcctgtt
tctgttgctcctgttggtactacatttacaaataatcttcaacctgagattacttcagga
tcacctgcctctccttccgtggtccctcaaactggaacaaaagtggaagaagttgaggca
cctggaaatactgtcaaaccatcagatgctggtgtgggaagggacggagcttctgttacc
gatgttaatactgctaaaacactgatggatggtgccaacaatacttcagttcagtatact
caaggttctgcggatggagttccagcagaagataaagaagatggtaaaactgattcatca
agagagaaaactgatgatgtggcttcagaaacaaaagtagttgagcctgagcccttagtt
tatgtgaataagatgggggctaaagacgcattcaaagcactactggagtctgtaaatgtt
ggatctgactggacttgggatcgggctatgcgagtaataattaatgacaaaaggtatggc
gccttgaaaacacttggagaaaggaagcaagctttcaatgagtacttaaatcagaggaaa
aaacaggaagtggaagaaaaacgtatgaaacaaaagaaagctcgggaagattttaagaaa
atgttagaagaatccactgagttgacttcatccactagatggagcaaagctgtgcctata
tttgaaaatgatgaacgtttcaaggctcttgagcgtgacagagaccgcagggatgtgtat
gatagtttcatggaggactttgttatcaaggaacgagcaagggcacaggtggaaagaaag
cagaacttgatggaattcaggatgtttttggaatcttgtgactttataaaggcaagcaca
caatggcgaaaagttcaagatcgcatagaggctgatgaaagatgttcccgtcttgagaaa
attgatcgcttggaaatattccaagactatttacatgatttagcgaaggaagaagaagag
cagaagaagatacaaaaggaagaattgagaaagacggaacgtaaaaaccgtgatgaattt
cgcaaattgatggaagaacatgttgctgcaggcattcttacagcaaaaactaactggcgt
gattatcattcaaaggtcaaggatttacctgcttatgtagcagcagcatcaaatacctca
ggttcaattccaaaagatttgtttgaagatgttgttgaagagctagagaaacaatataat
gaagagaagagtcgaataaaagatgcagtgaagttggcaaagatcactttgtcttcaaac
tggaatttagaggacttcaaatcaaccatatcaaaagacattagctctccacctgtatct
gagttcaacttaaagctagtgtttgatgagctactggaacgggcaaaggagaaggaggag
aaggaggctaagaagcgtaaacggcttgcagatgatttctttcatctactaagttctatt
aaggacatgactgcatcttcaaagtgggaggactacggaccacttatcgaagatagtcaa
gagttcagatctattggagatgagaacctttgcaagggattatttgaggagtacattata
caactgaaagaagagacaatagagaatgagcggaaacggaaagaggagaaggtgaagaag
gaaaaggataaggaggaaatagaaagaaggaaaggcaagcaaagaagggaaaaagaggga
gggcgtgaaagagagaaaggggaggcacacgtgaaggataaagcagagagtgatggtgca
gacaaaaggtctgaagatggtaatagaaaacggcggaagcagcaccgaagtcctgaggat
atttctcatgaaaaggataaagacaggtctaagaaatctcatgggcacagtagcagccgc
aagaaatcaagacggcagcatggtcatgaatcagatgaaagccggcacaaaagacacaag
agagaacaccgcagcgattctcacagagaaggtgatcatggaaatcttgaaggtggggag
catggtgatagtgtggtggatagatggtag
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