Lupinus angustifolius (narrow-leaved blue lupine): 109336336
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Entry
109336336 CDS
T04664
Name
(RefSeq) protein CHROMATIN REMODELING 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109336336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lang03036
]
109336336
03400 DNA repair and recombination proteins [BR:
lang03400
]
109336336
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109336336
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
109336336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
109336336
NCBI-ProteinID:
XP_019428414
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All DBs
Position
LG20:complement(10697970..10705929)
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AA seq
1202 aa
AA seq
DB search
MEEEQDRILLNTLGVKSANPEDIERHIIQKARNDVVTDTAEGSTKEENHHVSENVDPSSS
TKAEELQQKLRALEFEIGAVASTIEDVENNGDYSGVGEDEQEQGIATGDDSSNGSDLQHV
LAAERLRSLKNTKAQLEKELKKLGKDNNSKSTEREKVIFDLVKEERTSKRKLKEKDKKLQ
KSSGKKLKKVSFNDDVDFDAVLDAASAGLVETERDELVRKGILTPFHKLKGFERRFQQPE
TSSSHNAAEDESAMDLVSDSVERTARSISEAARARRTTKLLNSEDVPKLEAPTIPFQRLR
KPLRVKDSNKKKRRPLPGRKWTKRVSSEDTCLEEHENANDGLDTSSCENLEAQDVELADH
DSSYIILEGGLKIPDKIFEALFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFL
GALHFSGMYKPSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPRKKQAKSDETK
DESDSSNDNDYERTSPTKSKRKWESLINRVVGSEFGLLITTYEQLRILGDQLLDIEWGYA
VLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVF
EAEFAVPIAVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPKKTEHVLF
CSLTSEQVSAYRAFLASTDVEEILDGQRNSLSGIDVMRKICNHPDLLEREHASSDPDYGN
LERSGKMKVVAQVLNVWKEQGHRVLLFTQTQQMLDIFENFMTVSGHIYRRMDGLTPIRQR
MALIDEFNVSTEIFIFILTTKVGGLGTNLTGADRVIIFDPDWNPSTDMQARERAWRIGQK
RDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFVLNLDGEAG
STETSNIFSQISEEVNIVSTNEDNHEKHIDSRTSESGYEDVADNDSKSQRGRGKEKVEQS
GGVDDETNILKCLFDANGIHSAMNHDLIMNANDEEKMRQEEQASQVAKRAAEALRQSRML
RSHDSVSVPTWTGRSGAAGAPTSVRRKFGSTVNPQVANNVKPSDELPSNGTNKINGFAAG
ASSGKALSSAELLARIKGNQEKAIGAGLEHQFGMMSSSTNQARSSRASENSSGFQPEVLI
RKLCTFLQQQGGSSNSASIVEYFKDRIPSKDLALFKNLLKEIATLHKGPNGSHWVLKPDY
QV
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaacaggatcgaattttgctcaacactttgggcgtcaaatctgcgaatcct
gaagacattgaacgtcacatcatacaaaaggcaaggaatgatgtggtgacagacactgcg
gaaggaagcaccaaggaagaaaatcaccatgtgtctgaaaatgttgatccttcatcttct
accaaagcagaagaacttcagcagaaattaagggcattagagttcgaaattggcgcagtt
gcttccacgattgaagacgttgaaaataatggagattatagtggtgttggtgaggacgaa
caggagcaagggattgcaacaggggatgattcctccaatggttcggatcttcagcatgtt
cttgctgcagaaaggctaagaagcctgaagaacacgaaggctcaactagagaaagagctt
aaaaagttgggtaaagataacaactccaagagtactgaacgtgaaaaagtgatatttgat
ttggtaaaggaagagagaacatcaaagaggaaacttaaggaaaaggataagaaattacag
aaaagctctggaaagaagcttaagaaggtctcatttaatgacgatgttgactttgatgct
gttttggatgcagcttctgcaggtcttgttgaaacagaaagggatgaattggtcagaaaa
ggaattttaaccccttttcataagttgaaaggcttcgagcgtcgctttcaacaacctgaa
acatcaagtagtcataatgctgctgaggatgaaagtgccatggatcttgtttctgacagt
gttgaaagaactgccagatcaatatctgaggcagcgagagctcgccgaaccaccaagctg
ctcaattctgaagatgtaccaaagcttgaggcacctactattccttttcagaggctcagg
aaaccactaagagttaaagattcaaataagaaaaagaggcggcccttgcctggtaggaaa
tggaccaagcgtgtttcaagcgaggatacatgtctggaagaacatgaaaatgcaaatgat
ggcttggacacttccagttgtgaaaatttagaggcacaagatgttgaacttgctgatcat
gattcttcttatataatattagaaggtgggctgaaaatccctgataaaatatttgaagct
ctatttgactatcaaaaggttggagttcaatggctgtgggaattgcattgccaaagagct
ggtggaattattggtgatgagatgggtcttggtaaaactgtccaggtcttgtcttttctt
ggtgctttgcatttcagtggcatgtacaaacccagtattattgtgtgtcctgttacactc
ttgagacagtggaaaagggaagctaataagtggtacccaaaattccatgtagagcttttg
catgactctgctcaggattctgctcctagaaagaagcaagctaaatctgatgaaacaaaa
gatgaaagtgatagttcaaatgacaatgattatgagagaacttcaccaactaaaagcaaa
agaaaatgggaatccctgataaatcgtgtcgtgggatcagaattcggattacttattacg
acttatgagcagttaagaatattgggggaccagttgcttgacattgagtggggctatgca
gttcttgatgaagggcatagaataaggaatccaaatgctgaagttaccctagtatgcaaa
cagttacaaactgtacaccgcataataatgaccggtgcacccattcagaacaaacttagt
gaactgtggtcattgtttgattttgtttttccgggaaaattgggtgttttgcctgtattt
gaagctgagtttgcagttcctatagcagttggtggatatgcaaatgcttcaccattacaa
gtatccacagcatacagatgtgctgtggtgctgcgtgatttaataatgccttatcttctc
cgacgcatgaaggcggatgtgaatgcccaacttccaaagaaaactgagcatgttctgttt
tgcagccttacatcagagcaagtatctgcttacagagcatttttagcgagcactgacgtg
gaggaaatattggatggacaaaggaactctctttctggaattgatgtgatgcgcaaaatc
tgcaaccaccctgacctacttgaaagggaacatgcctccagcgatccagattatggaaat
ctagaacgcagtgggaaaatgaaagttgtagctcaagtccttaatgtttggaaggaacag
ggtcaccgtgttcttctttttactcaaacccagcaaatgcttgacatttttgagaatttt
atgacagtttctggtcatatttaccgcagaatggatggtctcactcccataagacagaga
atggctttaatagatgaatttaatgtctcaactgaaatatttattttcattttaacgacc
aaagttgggggtttggggacaaatcttactggtgctgacagggtgatcatctttgaccct
gattggaatccttcaactgatatgcaggctagagagcgtgcttggcgtataggccagaaa
cgggatgtgacagtttataggttgataacacgtggtactatagaggaaaaagtgtatcac
cgtcagatttacaaacattttcttactaataagatattgaagaacccacagcagaaaaga
ttctttaaagcccgagatatgaaagatctttttgtattgaacttggatggagaagctgga
tcaactgaaacatcaaatattttcagtcaaatatctgaagaagtaaatatcgtcagcaca
aatgaagataatcacgaaaagcatatagatagccgaacttctgaatcaggttatgaggat
gtagctgataatgacagcaagtcacagagaggaaggggaaaagagaaagttgaacagagt
ggtggagttgatgatgaaacaaatatcctgaaatgtctgtttgatgctaatgggatacat
agtgccatgaaccatgatttgatcatgaatgccaatgatgaagagaagatgagacaagag
gagcaagcttcccaggttgcaaaaagagctgcagaagctttacgccagtcacgaatgctc
cgaagccatgatagtgtatctgtcccaacatggacaggaaggtcaggtgctgctggtgca
ccgacatctgttcggcggaagtttggttcaactgtgaacccccaggtggcaaataatgtc
aaaccttctgatgagttacccagcaacggaactaacaaaatcaatggatttgctgctggg
gcatcttccggtaaggccttatcatctgctgaactattggctcgaattaaaggtaaccaa
gaaaaggccatcggtgctgggcttgaacatcagtttggtatgatgtcaagttccacaaac
caagcaaggtcttctagggcttctgaaaattcatcaggatttcaacctgaggtattgatt
cggaaactatgtaccttcctacaacagcaaggtggaagttccaattcagccagcatagtt
gagtattttaaggacaggataccctcaaaagatcttgctctgttcaagaatctgttaaag
gaaatagcaactctgcataaaggaccaaatgggtcgcattgggttctgaagccagactat
caagtatag
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