Lupinus angustifolius (narrow-leaved blue lupine): 109337282
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Entry
109337282 CDS
T04664
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03013
Nucleocytoplasmic transport
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109337282
09122 Translation
03013 Nucleocytoplasmic transport
109337282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109337282
03041 Spliceosome [BR:
lang03041
]
109337282
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109337282
Spliceosome [BR:
lang03041
]
Complex C
Other components
EJC/TREX
109337282
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109337282
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
DSE1_N
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
eIF2A
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_IFT140_1st
Tricorn_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
TRM82_WD
Beta-prop_DCAF12
WDR90_beta-prop_4th
PAC11
Beta-prop_IFT80_2nd
Beta-prop_WDR41
Beta-prop_Nup120_160
TP_0598_N
Beta-prop_ACSF4
WD_LRWD1
Beta-prop_WDR11_1st
DUF7099
Motif
Other DBs
NCBI-GeneID:
109337282
NCBI-ProteinID:
XP_019429766
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MTRNKVLAPFPHISNPCVFFTLISHCFTSSLVWKIFVLKLERETVPHSSDSFLVSTMDEK
FPFKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWYIEPHGHGKVKDIELKGH
TDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHVAV
GNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLSYPSLRPLD
TLTAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFNHTG
DFIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGV
FRIFGFENA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaataaggttttggcaccgtttcctcatatctccaacccatgcgtttttttc
actctcattagtcactgtttcacatcctcactcgtttggaaaatctttgtactcaagctt
gaaagagaaacagtgcctcatagttctgattcgtttcttgtttccaccatggatgaaaaa
ttcccttttaaaaatctccatagcagagagtattccggtcacaagaaaaaggttcactct
gtggcttggaattgtattggcacaaaacttgcttctggatctgtggatcaaactgcgaga
atctggtatattgaaccacatggacatggtaaggtcaaagatattgaattgaagggtcac
actgatagtgtggatcagctatgctgggaccccaaacatgctgatctgatcgcaactgca
tcgggtgacaagactgtccgtttgtgggatgctcgtagtggaaaatgctcacaacaagca
gaacttagtggggagaatatcaacatcacctacaaacctgatggaactcatgtagctgta
ggtaatagggatgatgaattaacaatactggatgttcggaagtttaaaccaattcacaag
cgcaagtttaattatgaggtgaatgagattgcttggaacatgaccggcgagatgttcttt
ctaactacaggaaatgggacggttgaagtgctgtcttacccatcccttcgacctcttgat
accctcactgctcatacagctggttgttattgcattgcaattgacccggtaggaagatat
tttgctgttggaagtgctgattcccttgtcagcctgtgggatatctcagagatgctctgt
gtgcgtacctttacaaagctagaatggcctgtccggacgattagctttaatcatactggg
gattttattgcttctgcaagcgaagacttgttcatcgatatttcaaatgttcacaccgga
cgaacagtgcatcagattccttgtagggctgctatgaacagtgttgaatggaatcctaaa
tacaatttacttgcatatgccggtgatgacaaaaacaagtatcaggctgatgaaggtgtt
ttccgaatttttggctttgaaaatgcctag
DBGET
integrated database retrieval system
