Lupinus angustifolius (narrow-leaved blue lupine): 109337947
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Entry
109337947 CDS
T04664
Name
(RefSeq) uncharacterized LOC109337947
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109337947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109337947
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109337947
mRNA degradation factors
5'-3' decay
Decapping complex
109337947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
109337947
NCBI-ProteinID:
XP_019430586
UniProt:
A0A394D9N3
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MDGVGAVNDFRGASNTLDLNHRLENDYKGGLFDASQYAFFGKGVTKDEVELGGLEDEDDY
MPALAFNEEEFFLNTKEADDLRSLSDIDDLTTTFLKLNKVVGGPRSAGVIGERGSRENSS
ASEWSQRDDIPYWFDQHAYESEGSQDGKRWSSHPHSSVTHLQESKPMYRTSSYPEKQPQE
QYRLQHCSSEPVSNWFFDQPFYDSETSEDGKRWSSQSQSSIGHFKESKPLYRTSSYPDER
QELTRFSSEPILLPKSSFTSYPLPGGRSQQASPNHSTGRLNIPYHAGGAHMTSSSQNRSH
LFNSGLQLSRSKHESHFSGNVRQLITGSPLNHQIQNQLVHQAGIYPGDHPNLLSNMLQKQ
LHHHSGSVSPHLMTQLQQHRLHYPVQQPAGYLSGFQSNLFNSQFSSGSSLVSKYEHMLGL
GDVREHKPKSSKKGRQSHRFSQQGSEASSQKSSFMFRSKHMTSDEIESVVKMQLGVTHCI
DPYVDDYYHQACLAKKTDGAKLKHSFCPTQIKDIPPRTRSNSESHGFLQIDASGRVSFSS
IRLPRPLLEVDLPNSSVTGSSEQNISQKALEQEPLFAARVTIEDGLRLLLEVDDIDRFLQ
SNQLQDGGTQLRRKRKVLLEGLATSLKLVDPLGKNGHKVGLAAKDDLIFLRLVSLHKGRK
LLAKYVLLLVPGSELMRIVCMAIFRHLRFLFGAIPLDPAAAETTSGLAKVVCQCVQGMEL
GDLSACLAAVVCSSELPPLRPLGSTAGDGASLILVSLLERATELLTDPQAVCNYNIGNRS
FWQASFDEFFGLLTKYCMNKYRSMTQSLHIHGTPNVTAIGSDSAKAISREMPVELLRASL
PHTNDHQRKLLLDFAQRSVPAVGFNSFAGSSGGHVNSETVLS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggatggggttggtgctgtgaatgattttcgtggtgcttccaacacccttgatcttaac
caccgcctggaaaatgattacaaaggaggtttatttgatgcatcccagtatgctttcttt
ggtaaaggcgttacaaaagatgaagttgagttgggtgggttagaagatgaagatgactac
atgccagctcttgcgttcaacgaggaagagttctttcttaatacaaaggaggcagatgat
ctaagatctctttccgatattgatgatctcactaccacttttttaaagttgaacaaggtt
gtcggtggaccaagaagtgcaggagttattggtgaacggggatcaagagaaaattcttct
gcttctgaatggtcacaaagagatgatattccctactggtttgatcagcatgcttatgaa
agtgaaggttctcaggatggaaaaagatggtcatcgcatccccattcttctgtcactcat
ctacaagagtcaaagcccatgtacagaacatcttcttaccccgagaagcaaccgcaggag
caataccgcctccaacattgctccagtgaaccagtttcgaattggttttttgatcaacca
ttttatgatagtgaaactagtgaggatggaaaaagatggtcatcacagtcacaatcctct
attgggcacttcaaagaatcaaagcccctatatagaacatcttcatatcctgacgagcga
caggagcttacccgtttttctagtgaaccaattttgttaccaaaatcttcatttacttct
tatcctctacctggtggtaggtctcagcaggcttctccaaatcacagtacaggccgcttg
aacattccttatcatgctgggggagctcatatgacatcatcatcacaaaatcgttctcac
ctcttcaattctggactgcaattgagtcgatcaaaacacgagtcacattttagtggaaat
gtgcgccaacttattactggctcccctcttaatcatcaaatacagaatcaattggtccac
caggcagggatatatcctggagatcacccaaacctcctgagtaatatgttgcagaaacaa
ttacaccatcatagtggatcagtgtctcctcacttaatgactcaattgcagcagcataga
ctgcattatcctgttcagcaaccagctggctacttgtcaggtttccagtccaatttgttt
aattcacagttctcttctggctcgtctttagttagcaaatatgaacatatgcttggtctg
ggtgatgttagagaacacaaaccaaaatcaagtaagaagggtagacagagtcatcgtttc
tcccaacagggttctgaagctagtagccagaagagcagttttatgtttaggtctaagcat
atgactagtgatgaaattgagagtgttgttaaaatgcaacttggtgtcactcattgtatt
gacccctatgtagatgattattatcatcaagcttgtcttgcaaaaaaaactgatggggct
aagttgaaacattcattctgtccgacccaaataaaggatattcctccacgaacccgttcc
aattctgaatcacatggtttccttcagattgatgcttcagggagggtttcattctcatct
attcgtctgcctcgtcctcttcttgaagtcgatcttcctaactcttctgtcactggtagc
tctgagcaaaatatttcacagaaggcccttgagcaggagcctttgtttgcagcgagagtc
acaattgaggatggtctccgtcttcttcttgaagtagatgacatagatcgtttcttacag
tctaatcagctgcaagatggcggaactcaactaagacgaaaacgaaaagtccttttggaa
ggactagcaacatcacttaaacttgttgacccactgggaaagaatgggcacaaagttggg
cttgctgccaaggatgacctaattttcttacgattagtttctcttcacaagggacgtaag
ctcttggcaaaatatgttctattgcttgttcctggtagtgagcttatgcggatagtatgc
atggcgatttttcggcatttaagattcttatttggtgctatccccttggatccagcagct
gcagagactacaagtggccttgctaaggttgtttgtcaatgtgttcaaggtatggaactt
ggtgatcttagtgcttgtcttgcagcagtggtttgttcctcagagctgcctcctctacgc
ccccttggaagcactgctggagatggtgcttcccttattttagtatctcttcttgagaga
gctactgaacttctaactgatcctcaagctgtttgcaactataatataggtaaccgttca
ttttggcaggcctcatttgatgaattttttggccttcttacgaagtattgcatgaataaa
taccgtagcatgacacaatccctccatatacatgggacaccgaatgtgactgcaattgga
tcggattctgctaaagcaattagtagggaaatgcccgttgaacttcttcgtgcgagtctt
cctcacaccaatgatcaccagaggaagttattacttgattttgctcagcgctctgtgcct
gcggttggatttaacagttttgctgggagcagtggtggtcatgtgaactcagagacagtg
cttagttga
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