Lupinus angustifolius (narrow-leaved blue lupine): 109338428
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Entry
109338428 CDS
T04664
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109338428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109338428
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109338428
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109338428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
RRP40_S1
ECR1_N
EXOSC1
S1
Motif
Other DBs
NCBI-GeneID:
109338428
NCBI-ProteinID:
XP_019431206
UniProt:
A0A394DBJ4
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Position
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AA seq
328 aa
AA seq
DB search
MRGIDLAALSKTQKLRLEKALEELESLSSKVNSDASVTIADSIAVNHEDAILKGHGTADL
NGEVVATLCGIVERVNKLIYVRGLRSRYKPEVGDIVIGRVVEVVQKRWKVEINYSQDAIL
MLSSMNMPDGVQRRRTAMDELNMRSIFEEKDVVCAEVRGFQHDGLHLQARSQKYGKLKGG
QLLTVPPYLVKRQKQHFHHLEEYGFDLILGCNGFIWVGEHIEAKDDMVEDQVNQSEPQVL
LPNKNATNLEEQEKNYTELETRKYICRAANAVRVLSTLGFNITLEIIKGIIELSLSLNLD
IHEMLSSEFCVVVAEKEAERRKSNKRRR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaatagatttagcagcattgagcaaaacacagaagcttcgtctcgagaaggct
ctagaagagttggaatcactttcatcgaaggtaaattccgatgcttctgtcaccatagcc
gattccatcgctgttaaccatgaagatgccattctcaaaggacatggaacggctgaccta
aacggtgaagtggttgcaacactctgcggcatcgtcgagagagttaataagcttatctat
gtccgtggattgcgttctaggtataaacctgaggttggagatatcgttatagggcgtgtt
gttgaggttgttcaaaagcgttggaaggtggagataaattacagtcaagatgcaattttg
atgctttcttccatgaatatgcctgatggtgtccagaggcgacggacagccatggatgaa
ctaaatatgcgcagtatttttgaagagaaggatgtggtttgtgctgaagttcgtggtttc
cagcatgatggcttacatcttcaagctagaagtcagaaatatggaaagctaaagggaggt
caacttcttacggttccaccttacttagtgaaaaggcaaaaacaacatttccatcatctg
gaggaatatggttttgatttgatacttggctgtaatggatttatatgggttggggaacat
attgaagccaaagatgacatggtagaagatcaagtgaaccaatctgaaccacaagtttta
ctgccgaacaaaaatgctactaatcttgaagaacaagagaaaaattacacagaattggag
acaagaaaatacatatgcagggctgctaatgctgttagagtattatctactttgggcttc
aatataacattggaaatcatcaagggaatcatcgagcttagcctttctctgaatcttgat
atacacgaaatgcttagttcggagttctgtgtcgtagttgctgaaaaggaggcagaaagg
agaaagtcaaacaaaaggaggaggtag
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