Lupinus angustifolius (narrow-leaved blue lupine): 109338723
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Entry
109338723 CDS
T04664
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109338723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lang04131
]
109338723
Membrane trafficking [BR:
lang04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
109338723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_2
Vps39_1
CNH
Clathrin
zf-HC5HC2H
DUF2175
zf-HC5HC2H_2
AlaDh_PNT_N
Motif
Other DBs
NCBI-GeneID:
109338723
NCBI-ProteinID:
XP_019431559
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Position
Un
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AA seq
996 aa
AA seq
DB search
MVHSAYDSFELLTDSPSKIESIESYGSKILLGCSDGSLRIYAPSQPPPLSQPDELRKEPY
ALERCVSGFAKKPLISMQVVESRELLLSLSESIALHRLPNFEAVAVITKAKGAHVFCWDE
ERGFLCFARQKRVCIFRHEGGRGFVEVKDFGVPDVVKSMCWCGDNICFGIRKEYLILNAA
NGTLSEVFTSGRLAPPLVVPVPSGELLLGKENIGVFVAQNGKLRPDGRICWSEAPVEVVM
QKPYAIALLPRFVEIRSLRDPYSLIQTVVLRNVRHLRQSNNSVILALDNSIHGLFPVPLG
AQIVQLTASGNFEEALSLCKLLPPEDSSLRAAKESSIHIRYAHYLFDNGSYEEAMEHFLA
SQVDITYVLSLYPSIILPKTTILHDPEKLMDNYGDALYLSRGSSGVSDDMESSPGSHMSE
PDENAALESKKMSYNMLIALIKFLQKKRYSVIEKATAEGTEEVVLDAVGDNISSYNSSRF
KKINKGGGSVPISSRAREMASTLDTALLQAFLLTGQTSATEELLTGLNYCDLKVCEEILQ
EGSYYVALLELYSCNSMHREALELVHKLVEESKSGQSEIAHRFKPEAIIDYLKPLCGTDP
LVVLEFSMLVLECCPTQTIDLFLSGNIPADMVNSYLKQHAPNMQATYLELMLAMNEDAIS
GNLQSEMVDIYLSEVLDWQADLSAQGKWDEKAYSPKRKKLLSALDNIPGYNPEALLKRLP
LDALYEERAILSGKMNQHELALSLYVHKLHVPELALSYCDRVYEYMLKPSGKTPSNIYLL
LLQIYMNPQRTTKSLEKRITNLLSPQKSMISRVVSSKKLLKTRSRGSKKIAAIEFAEDTK
ASLSSTDSGKSDAEEFIEEGGTSIMHDEVLDLLSRRWDRINGAQALKLLPRETKLQNLIP
FLGPLLRKSSEMYRNGSVVKSLRQSENLQVKDELYNKRKTVVKITGDNMCSLCNKKIGAS
VFAVYPNGKTLVHFNCFRDSQSMKAVAKGSPLRKPF
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacagcgcctacgattccttcgagcttctgactgattccccttccaagatcgaa
tccatcgaatcctacggttccaaaatcctcctcggctgctccgacggatctctccgtatc
tacgcgccgtcacagcctccgccgttatcgcaaccggatgagctgagaaaggagccatac
gcgctcgagagatgcgtgagcggcttcgcgaagaaacctctaatttcaatgcaggttgtg
gaatcgagggagctgttgctgtcgttatctgaatccatcgcgcttcataggctacccaat
ttcgaagctgtagcggttatcactaaggccaaaggcgcccatgtgttctgctgggacgag
gaaagagggttcttgtgcttcgctaggcaaaagcgggtttgtattttcagacatgagggt
ggtagaggatttgtggaggtgaaagactttggtgttcctgatgtggtgaagtcgatgtgt
tggtgtggtgataatatatgcttcgggattagaaaggaatatttgattttaaatgctgca
aatggcacattatctgaggtttttacttctgggagactagcaccacccttagttgtccct
gttccttctggagaacttctacttgggaaggagaacattggtgtatttgtggctcaaaat
ggaaaacttcgtccagatggtaggatttgctggtcagaggccccagtagaagttgtaatg
caaaagccatatgctatagcactgcttcctagatttgtggagattcgatctctccgagat
ccatattcactgatacaaacagtagttcttcggaatgtacgccatcttcgccaaagcaat
aattctgtgattcttgctttagataattctattcacggcctcttccctgttcctcttggg
gcccagattgtccaattaacagcctctggcaactttgaagaagccttgtcattgtgcaag
ctccttccacctgaagattcaagtcttcgcgctgcaaaggagagttcaattcacataaga
tatgcccactatctttttgacaatggcagctatgaagaggcaatggaacattttctggca
tctcaagtagatataacttatgtgctgtctctgtatccatcaattatccttccaaagaca
actattcttcatgacccagagaagttgatggacaattatggggatgctttatatctctct
agaggttcttcgggtgtgtcagatgatatggagtcctctccaggatctcatatgtcagaa
cctgatgagaatgcagcccttgagtccaaaaaaatgagctataatatgcttatcgctctc
ataaagtttttgcagaagaagagatacagtgttattgagaaggccactgcagagggaacc
gaggaagttgttttagatgcagtaggggataacatctcatcctataatagtagtaggttt
aagaaaataaacaagggtggtggtagtgtacctattagttcaagagctcgggagatggcc
tcaacattggatactgctctactccaagccttcctgcttactgggcaaacttctgcgact
gaagaattactgacaggtcttaactactgtgatctgaaagtatgtgaagaaatacttcag
gaaggcagctattatgttgctttattagaactttacagttgcaactcaatgcaccgggaa
gctcttgaacttgttcacaaattggtggaagagtcaaagtctggccaatctgagattgca
cataggttcaagcctgaggccatcattgactatctcaagccgctgtgtggaacagacccc
ttagttgttttagagttctcaatgcttgttctcgaatgctgcccaacccaaactattgac
ctctttctgtctggaaatattccagcagatatggtgaactcatatttaaagcaacatgct
ccaaacatgcaagccacatacttggagctcatgcttgcgatgaatgaggatgccatatct
ggaaatctgcaaagtgaaatggtagacatctatctttccgaagtacttgattggcaagcg
gatttaagtgctcaagggaaatgggacgaaaaagcttattccccaaagagaaaaaagtta
ttgtctgccttggataatataccaggatacaatccagaggctcttctgaaacgtcttcca
ctagatgctttatatgaagagcgtgcaatattgtcgggaaaaatgaaccaacacgaacta
gcattatctttgtatgttcacaagcttcatgttccagagctggcattatcttattgtgac
cgggtgtatgagtatatgctcaagccttctggaaaaactccaagtaacatatacctattg
cttctgcaaatctatatgaatccacaaaggacaaccaagagccttgaaaagagaattaca
aatctattatccccccagaaatcaatgatttcaagggttgtcagttcaaaaaaactacta
aaaaccagaagccgagggtctaagaaaatagctgcaatagagtttgcagaggacacaaaa
gctagtttgagcagcactgacagtggcaagagtgacgctgaggaatttattgaggaagga
ggtacttctatcatgcatgatgaggtcctagatttgttgagccgtaggtgggatagaatc
aatggagcccaggcacttaaacttttacctcgagagactaaactgcagaacctgattcca
tttcttggacccctgctgagaaaatctagtgaaatgtatcgtaatggctcagtggtcaag
agcttgagacagagtgagaaccttcaggtgaaagatgaactctacaataaaagaaaaaca
gttgtgaagataaccggtgataacatgtgttctctgtgcaataagaaaataggggctagt
gtttttgcagtctacccaaatgggaaaactctagtgcacttcaattgtttcagggattct
caaagtatgaaagctgtagccaaagggtctccattgaggaagccattttga
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