Lupinus angustifolius (narrow-leaved blue lupine): 109341115
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Entry
109341115 CDS
T04664
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109341115
03041 Spliceosome [BR:
lang03041
]
109341115
03036 Chromosome and associated proteins [BR:
lang03036
]
109341115
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109341115
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109341115
mRNA cycle factors
Common to processing body (P body) and stress granule
109341115
Spliceosome [BR:
lang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109341115
Chromosome and associated proteins [BR:
lang03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109341115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109341115
NCBI-ProteinID:
XP_019434483
UniProt:
A0A1J7FNL8
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Position
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AA seq
606 aa
AA seq
DB search
MTTSWADSVDNSGNASVRPTRSAYVPPHLRNQTLSSEPSAAAASYSSSVAASDHVGYGGQ
AAGSHGGISSKPDFGRQGYGSNVQIGGGSGGGWNGRGIARDRGRREVNPFEKDEPVDQAL
DEQENTGINFDAYDDIPVETSGDNVPPPVNTFADIDLGEALNQNLQRCKYVKPTPVQRYA
IPISLAGRDLVACAQTGSGKTAAFCFPIISGIMREQYVQRPRVARTAFPMALILAPTREL
SCQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSL
QMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEIQGLASDFLS
NYVFLAVGRVGSSTDLIVQRVEYVLESDKRSHLMDLLHAQRENVIHGKQSLTLVFVETKK
GADALEHCLCVNGFPATSIHGDRTQQERELALRSFKSGNTPILVATDVAARGLDIPRVAH
VVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNESNLSMAKPLSDLMQEANQEVPAWLT
RYAARASYGGGNRNRRSGGARFGGRDFRKEGSFNKGGDYYGGTTGGYGVPGNYGGGHAQG
VSSAWD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcatgggcggattctgttgacaactcaggcaatgcttcagtgcgccctacc
cgatcggcatatgttcctccgcatcttcgcaaccagacattgtcttcggagccctcagct
gcggcagcatcatactcgtcttcagtggcagctagtgatcatgtgggttatggcggtcag
gctgctggttctcatgggggtatatcgtcgaagcctgatttcgggcgccagggatatggt
tctaatgttcagattggtggtggtagtggtggtggctggaatggtagagggatagcgagg
gaccgtgggaggcgtgaggtgaaccctttcgagaaagatgaacctgtggatcaagctctt
gatgagcaagagaacactggcattaactttgatgcttatgatgatatccctgtggagact
agtggggataatgtgcctccacccgtaaatacattcgcagacatagatttgggtgaggca
ttgaaccaaaacttacagaggtgcaagtatgtcaaaccaactccagttcagaggtatgcc
ataccgatttctctcgcggggagagatttggtggcctgtgcacagacagggtctggaaag
acagctgccttttgctttcctattataagcggaataatgagagagcagtatgttcaaaga
ccacgtgtagcgcggactgctttccctatggctcttatccttgcccctactcgggagctt
tcttgccagatacatgatgaggccaaaaagttttcttatcaaactggtgtcaaggtggta
gttgcttatggaggagcaccaatcaaccaacagttgcgggagcttgagaggggagttgat
attctagtggcaactcctggacgattggtggatttgctcgagagggctagggtctcattg
cagatgataagatatttggcacttgatgaggcagatcggatgcttgatatgggttttgag
cctcaaataagaaagatagttgaacagatggacatgcctcctcctggcatgagacagact
ttgctgttcagtgccacattccccaaagagatacagggacttgcatcggattttctttca
aactacgtgtttctcgccgttggaagggtcggttcaagtactgatctaattgttcaaaga
gtagaatatgtgcttgagtcagacaagagaagccacctcatggaccttctccatgctcag
agggaaaatgtaattcatggaaaacaaagtctgacattagtttttgtggaaacaaagaaa
ggagctgatgcattggaacactgcttgtgtgttaatggatttcctgcaactagcattcat
ggtgacagaacacaacaagaaagagaactagcattgaggtcattcaagagtggaaacaca
ccaattttagtggccacagatgttgctgcacgtggccttgacattccacgggtagcacat
gtggtaaactttgaccttcccaatgacatcgatgattatgtgcatcggataggaagaaca
gggcgagctgggaaaatgggattagcaacagccttcttcaatgaaagtaatttatccatg
gctaaaccattgtctgatctgatgcaagaggcaaatcaagaagtacctgcctggctcaca
cgttatgcagcaagggcatcttatggtggcggcaacagaaacaggcgctcagggggagcc
cgtttcggtggccgtgattttcggaaggagggttcctttaataaaggaggagattactat
ggtggaacaacaggcggatatggtgttcctggcaattatggtggagggcatgctcaaggt
gtgagcagtgcttgggattag
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