Lupinus angustifolius (narrow-leaved blue lupine): 109342466
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Entry
109342466 CDS
T04664
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109342466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109342466
03009 Ribosome biogenesis [BR:
lang03009
]
109342466
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109342466
Spliceosome [BR:
lang03041
]
Complex A
U2 snRNP components
U2 related factors
109342466
Complex B
109342466
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109342466
Ribosome biogenesis [BR:
lang03009
]
Eukaryotic type
90S particles
Helicases
109342466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109342466
NCBI-ProteinID:
XP_019435992
LinkDB
All DBs
Position
LG03:25474377..25477383
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AA seq
487 aa
AA seq
DB search
MILIKYHKYKYNDVKTVPYWTVRPENWQTGSLTSTPPGDILVFLTGEEEIEDACRKINKE
VGNLGDQVGPVKAVPLYSTLPPAMQQKIFEPAPPPLKEGGLPGRKIVVSTNIAETSLTID
GIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFN
NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDD
EGNLTKLGEIMSEFPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCFVRPREAQKAAD
EAKARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYENFINQRGLKSADNVRQQLVRIMGRF
NLKLCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQTVHLHPSNCLDHKP
EWVIYNEFVLTSRNFIRTVTDIKGEWLVDIAPHYYDLENFPNCEAKRVLDKLYKKREREK
DEARSRK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgattttaataaagtaccataagtacaagtacaatgatgtaaaaaccgtaccgtactgg
acggttcgaccagaaaactggcaaaccggatccctaaccagtacgcctcctggagatata
cttgtttttttgactggagaggaagagatagaagatgcatgccgcaaaataaacaaagag
gttggaaatctgggtgaccaggtaggccctgtgaaagcagtacccctgtattccactctt
cctccggctatgcagcagaagatttttgagccagctccacctccgctgaaggagggaggg
cttcctggaaggaagatagtggtatcaactaacattgcagaaacttctttaacaattgat
ggtattgtctacgttattgacccggggtttgctaagcagaaggtttataacccacgaatc
cgtgtcgagtctttgttagtgtctccaatatcgaaagccagtgcacatcagagatcaggg
cgtgctggtagaactcaaccaggaaaatgttttagactttatactgaaagaagtttcaat
aacgatctacagccacagacttatcctgaaattttgagatcaaatcttgccaacacagtt
cttaccttgaagaagctcggtatagatgatttagtgcattttgatttcatggaccctcct
gcccccgagacattaatgcgtgcattggaagtgttgaattacttgggtgcattggatgat
gaaggtaacttaacaaagctcggggagataatgagtgaatttcccttggatccacagatg
tcaaagatgcttgttgtcagtcctgagttcaactgttcaaatgagattttgtcaatttcc
gccatgctctcagtacccaattgctttgtccggcctagggaggcacaaaaagctgcagat
gaagcaaaagcaaggttcgggcacatagatggagatcatctaacactcttgaatgtctac
catgcatacaagcaaaataatgaagatccctcttggtgctatgaaaacttcattaatcaa
agggggctgaaatcagctgataatgttaggcaacaactggtgcgtatcatgggccggttt
aatctgaagttatgcagcactgacttcaatagccgtgactactatatcaacataaggaag
gctatgctagctggatactttatgcaggttgctcatctggagcgtacaggacactacttg
actgtgaaagataaccagacggtgcatttgcatccttcaaattgcttggatcacaaacct
gaatgggttatctacaatgaatttgttcttaccagtcgaaattttattcgtactgtgaca
gacataaaaggggaatggctggttgatatagcaccgcactactatgatctggaaaatttt
ccaaattgtgaggcaaagcgtgttctcgacaaactttacaagaaacgggagagggaaaag
gatgaagccaggagccgcaaatga
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