Lupinus angustifolius (narrow-leaved blue lupine): 109343149
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Entry
109343149 CDS
T04664
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109343149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109343149
Enzymes [BR:
lang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109343149
Spliceosome [BR:
lang03041
]
Complex C
Other components
Step II factors
109343149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
nSTAND3
AAA_16
TsaE
Sigma54_activ_2
Flavi_DEAD
ABC_tran
GIPC1_GH2
PhoH
Motif
Other DBs
NCBI-GeneID:
109343149
NCBI-ProteinID:
XP_019436858
UniProt:
A0A1J7IMS8
LinkDB
All DBs
Position
LG03:complement(4076168..4081670)
Genome browser
AA seq
1217 aa
AA seq
DB search
MAEDNLDEGLKKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDATLK
ENGAEMPDYFVRTLLTIIHAILPPNKSKKSDAKKESSAPTTNTKFKALAIADDRDRVKEL
QKEIENETEAARQKGRERGEEEYGYGDRDNRDRRRDRYEREDRHRSRDRERDVDEDDRRD
DYRRRGRDRDRDRDRDVGEDERRDDYRRRGRGRDKDRGRDRYGRDERDGYEENERGRENG
DENGDRKGRRDSRHGGGGSSEPDLYQVYKGRVSRVMDTGCFVQLDDFRGKEGLVHVSQIA
TRRITNAKDVVKRDLEVYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDVSRMNP
QDSKDGPVARTGLSGIRIVEEDDLGKSRRPLKRMSSPEIWEAKQLIASGVMSVSEYPTYD
EEGDGMLYQEEGAEEELEIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQS
ALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKK
DAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQY
LAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYM
TDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPEMRLIVTSATLD
AEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLT
GQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNI
AEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYR
LYTESAYRNEMSPTSIPEIQRINLGTTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQL
YSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP
REKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQ
LLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHASRKDPQEGYRTLVENQPVYIHPSSAL
FQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPL
YDRYHEPNSWRLSKRRA
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggataatttagatgaaggattgaagaagaagctcgaatacttgtcccttgta
tcaaaggtttgcaccgagttggaatctcacaccggcaccggcgacaaggtcctcgccgag
ttcataaccgagttaggtcggtcatcggaaaacgtcgaagaattcgatgcgactctgaaa
gagaacggtgctgaaatgcctgattacttcgtccgaacgcttctcaccataattcacgcc
atccttcctcccaacaagtccaagaagtcagatgctaagaaagagagttcggcgccgacg
actaatacaaagtttaaggctctggccattgctgatgatagggaccgtgtaaaggagctt
cagaaggaaatcgaaaacgaaacagaagctgcgcgacagaaagggagagaacgaggagaa
gaggaatatggttatggagatagagataatagagataggcgcagagacaggtatgaaaga
gaggatagacatagaagtagggatagagaaagagatgttgatgaagatgatagaagggat
gattataggagaaggggaagggacagggatagggatagggatagagatgttggtgaagat
gaaagaagggatgattacaggagaaggggaaggggtagagataaggataggggcagggat
agatatggcagagatgaaagagatggctatgaagaaaatgaacgaggaagggagaacggt
gatgagaatggtgataggaaaggtcgaagagattcgaggcatgggggtggtggttctagt
gaacctgacttgtatcaggtttataaagggagagtgtcaagggtgatggatactgggtgt
tttgttcagcttgatgattttagagggaaagagggcttggtgcatgtttctcagattgcg
actcggaggattactaatgctaaggatgtggtgaagcgggatctggaggtttatgtgaag
gtgatatcggtttctggtcagaaattgagtctttcgatgagggatgttgatcagcatact
gggaaggatcttcttccattgaagaagagctcagaggatgatgtttctcggatgaatcca
caggattcgaaggatgggccggttgccaggacgggactttcgggaatcaggattgtggaa
gaggatgatcttggtaaatcgcgtagacctttgaagaggatgagctctccggagatatgg
gaagcaaaacagttgattgcttctggtgttatgagtgtttcggagtacccgacttatgat
gaggaaggagatggaatgctgtaccaagaggaaggtgctgaggaagagcttgagattgag
atgaatgaggatgaacctgcctttttgcaagggcagagtagatattccatggatatgtct
cctgttaagatttttaagaatccagaaggttctttgggtcgtgctgctgctctccagtct
gcacttataaaggagcgtagagaggtacgagaacaacaacaacgcacaatgctcgattca
attccaaaggatctcaatcgtccttgggaagaccctatgccagagtctggtgaaaggcat
cttgcccaggagcttaggggcgttggcttatcagcctatgacatgccagaatggaagaag
gatgcttatgggaaaaccattacttttgggcaaagatcaaagctttctatccaggaacag
aggcagagtttaccaatttacaagttgaaaaaagaattgattcaggcagtccatgataat
caggtgttggtggtcattggtgaaacgggttcgggcaagactactcaggtcacgcagtat
ctcgctgaagctggttacacaacaagaggtaaaattggatgtactcaaccacgtagggtg
gctgcaatgtcggttgcgaagagagtggctgaagagttcggttgtcggttgggagaggaa
gttggttatgccattcgatttgaggattgcactggaccggatactgtaatcaagtacatg
acagatggtatgcttctgagagaaatattggttgatgaaaatctgtcacagtattctgtt
ataatgcttgatgaggcccacgaaagaactattcataccgatgttctgtttgggctgctg
aagcagctagtgaagcgtagacctgaaatgcgattgattgtgacttctgctactctggat
gctgagaaattctcaggatatttctttaactgtaacatttttacaattcctgggaggact
tttccggtggagattctttatactaaacaaccagaaagtgattacttagatgcatcttta
atcactgtcctacagatccacttgacagaacctgaaggagacattcttctcttcttgact
ggtcaagaggagattgattttgcttgccagtctctctatgagagaatgaaggggttaggt
aagaatgttcctgagttgatcattttgcctgtttatagtgcccttcctagtgaaatgcaa
tcgaggatatttgaccctgctcctcctgggaagaggaaggtggttgtggccactaacatc
gctgaggcttctttgactattgatggaatattttatgtgattgatcctggattcgccaag
caaaatgtttataatccaaagcaaggtcttgattctttggtgataactccaatttcacaa
gcatcagccaaacaaagagctggacgtgcagggcgtaccggacctgggaaatgttatcgc
ctctatactgagagtgcatataggaatgagatgtctcctacttcgattccggagattcaa
aggataaatctcgggacaactactcttaatatgaaagctatggggataaatgatcttctg
tcttttgattttatggacccaccgtcacctcaagctcttatttctgccatggaacaactt
tacagtcttggagcattggatgaagagggccttttaaccaagttggggaggaaaatggca
gaatttcctctggatccaccattgtccaagatgctgcttgccagtgtggaccttggatgc
agtgacgagattttgactataattgccatgattcagactggcaatatattttacaggcct
agggaaaaacaagcccaagcagatcagaaaagggcaaagtttttccagcctgagggtgac
catctcacactgcttgctgtttatgaggcttggaaagctaagaatttttctgggccctgg
tgttttgagaactttgttcaatctcgatcgttgagaagagcacaggatgtcaggaaacag
cttctgaccatcatggataagtataaattggatgttgtaagtgcgggtaaaaacttcacc
aagatcaggaaggctatcactgcaggattctttttccatgcatcaagaaaggaccctcag
gaaggttacagaaccctagttgaaaaccagcctgtatacatccatccaagttctgctttg
ttccagagacagccagactgggtcatctatcatgagcttgttatgactactaaggaatac
atgcgtgaggtcactgtcatagaccccaaatggcttgttgaattggctcctagattcttc
aaagtggcagatcctacaaagatgagcaagcgaaagcgtcaagagcgtatagaaccactt
tatgatagataccacgagccaaactcatggcgtttgagtaaacgtcgtgcatga
DBGET
integrated database retrieval system
