Lupinus angustifolius (narrow-leaved blue lupine): 109343271
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Entry
109343271 CDS
T04664
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109343271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lang04131
]
109343271
Membrane trafficking [BR:
lang04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109343271
Hops complex
109343271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_11
zf_RING_Vps8
Nup54_57_C
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-C3HC4
zf-RING_Vps41
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
109343271
NCBI-ProteinID:
XP_019437036
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All DBs
Position
LG03:6179840..6196925
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AA seq
988 aa
AA seq
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MVDQGRHVFTVDLLERYAAKGRGVITCIAAGNDVIAIGTSKGWVIRHDFGVGDSSEIDLS
AGHPGEQSIHRVFVDPGGSHCIATVVGPGGAETFYTHAKWTKPRVLSRLKGLVVNAVAWN
RQQITEVSTKEVMIGTENGQLYELAVDEKDKKEKYIKFLFELAELPEAFMGLQMETATII
NGTRYYVMAVTPTRLYSFTGFGSLETVFSSYVDRTVHFMELPGEIPNSELHFYIKQRRAV
HFSWLSGAGIYHGGLNFGGQNSSSGGNENFIENKALLNYSKLSEGSEEVKPSSMALSEFH
FLLLLGNKVKVVNRISEQIIEELQFDQTSDSASKGIIGLCSDATAGLFYAFDQNSIFQVS
INDEGRDMWKVYIDMKEYAAALANCRDPFQRDQVYLVQAEAAFSTKDYFRAASFYAKINY
ILSFEEVTLKFISAGEQDALRTFLLRKLDNLEKDDKCQITMISTWTTELYLDKINRLLLE
DDSASDSSNSEYQSIIKEFRAFLSDSKDELDEATTMKLLESYGRVEELVYFASLKGQYEI
VVHHYIQQGEAKKALEVLQKPSVAIDLQYKFAPELIALDAYETVESWMATKNLNPRKLIP
AMMRYSSEPHAKNETHEVIKYLEYCVHRLHNEDPGVHNLLLSLYAKQEDDSSLLRFLQCK
FGKGQKDGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEA
DKVEDDEDLRKKLWLMIAKHVVEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFA
LIDDFKEAICSSLEDYNKQIEQLKEEMNDATHGADNIRNDISALAQRCTVIERDEECGVC
RRKILTAGREFGMDRGYTSVGPMAPFYVFPCGHSFHAQCLIAHVTRCTVESHAEHILDLQ
KQLTLSGSEARRESNGTLSSEESIPSMTNVDKLRSQLDDAIASECPFCGDLMIREISLPF
ILLEENQHVLSWEIKPNVGSQRNISLPA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcaaggaagacatgttttcacggtggatcttctagaacgatatgctgcaaaa
gggcgtggagttattacttgcattgctgctggaaatgatgttattgcaattggaactagc
aaaggctgggttatcaggcatgattttggggttggtgattcatctgaaattgatctctct
gctggtcatcctggggagcagtcaatccacagggtttttgttgatcctggtgggagtcac
tgtatcgccactgttgttggtccagggggagctgaaacattctatactcatgcgaaatgg
accaagccgcgagttttgagcaggctgaaaggtctggttgtgaatgccgttgcatggaat
aggcaacaaataacagaagtttccacaaaggaagtcatgattggtacagaaaatggtcaa
ctttacgaactggctgtggatgagaaggacaagaaggagaagtatatcaagtttctgttt
gaattagcagaacttcctgaagcttttatgggtttgcagatggagacagctaccataatt
aatgggactagatattatgtgatggctgttactcctacacggctttactctttcactggc
tttggatccctcgaaactgttttttcaagttatgtagatcgtacagtgcatttcatggaa
cttcctggtgaaataccaaacagtgagctccatttttacattaagcaacgaagagctgta
catttttcatggctatctggagctggtatctaccatggtggcttaaattttggaggacaa
aatagctcttctggtggaaatgaaaattttattgagaataaggctcttttgaactactca
aagttatctgaaggatccgaggaagttaaaccaagttcgatggcattgtctgaattccat
ttcttattgcttttagggaataaggtcaaggttgtaaacagaatcagcgagcaaatcata
gaggaacttcagtttgatcaaacttcagattcagcatcaaagggtattattggactatgc
agtgatgccacagctggtttattctatgcatttgatcaaaactccatcttccaggtgtct
atcaatgatgaaggtcgggatatgtggaaagtatatattgacatgaaagaatatgctgct
gctttagcaaattgtcgtgacccttttcaaagggaccaagtatatttagttcaggctgaa
gctgcattttccactaaagattattttagagctgcatctttctatgccaaaatcaactat
attttatcgttcgaggaggttactctgaagttcattagtgctggggaacaggatgctttg
agaactttcttattgcggaagctggataatttagaaaaggacgataaatgccaaataaca
atgatatctacatggactactgaattatacctggacaagattaatcgacttcttttggaa
gatgactctgcttcggatagtagcaattcagagtaccaatcaattattaaagagtttcgt
gcttttctcagcgacagcaaggatgaattggatgaagcaactacaatgaaacttctagaa
agttatggaagggttgaagaattagtatattttgctagcttaaaagggcagtatgagatt
gtagttcaccattatattcagcaaggagaggcaaaaaaagcactggaagtgcttcagaaa
ccttctgtggctatagatcttcagtacaagtttgctcctgagcttattgcccttgatgca
tatgaaactgtggagtcatggatggctacaaagaaccttaacccaaggaaacttattcct
gcaatgatgcgttattcaagtgaacctcatgcgaagaatgagacacacgaagttatcaaa
tatcttgagtattgtgttcatagattgcataatgaagatcctggagttcataacctgctg
ctgtctttatatgcaaagcaggaggatgatagttcactcctacgtttcctacaatgcaaa
tttggaaaagggcaaaaagatggtcctgaattcttctatgatcctaagtatgccctgcgt
ctttgcctcaaggaaaaacgaatgcgtgcatgcgttcatatatacagcatgatgtctatg
catgaagaagcagttgctcttgccctacaggttgatccagagcttgctatggccgaagct
gataaggttgaagatgatgaagacttgagaaagaagctctggctcatgattgctaagcat
gttgttgagcaagaaaaaggaactaagagggaaaacattaggaaagcaatcgcatttctt
aaagaaactgatggcctcctgaagattgaagatatattaccattctttccagattttgcc
ctgattgatgacttcaaggaggctatctgctcctcattggaggattacaacaagcaaatt
gaacaacttaaggaagagatgaatgatgcaactcatggcgctgacaatattagaaatgat
atcagtgcacttgctcaaagatgtactgttattgaacgtgacgaggaatgtggggtatgt
cggcgcaaaattctaactgctggcagggaatttggcatggatcgtggttatacatcagta
ggaccaatggctcctttttatgtctttccgtgtggacactccttccatgcacaatgtctg
attgcccatgtgactcgttgtactgttgaatcccatgctgagcatattctggatctgcag
aagcaacttactttgtcgggcagtgaagcaaggagggaatccaatggcaccctttcttca
gaggagtccataccaagcatgaccaatgtagataagctccggtcacaattggatgatgct
atagctagtgaatgcccattttgtggtgacttgatgatcagagagatttctttgcctttt
atccttcttgaggaaaatcagcatgtgttatcatgggagatcaaaccaaacgttggaagc
caaagaaatatctccttacctgcttga
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